Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_2786 |
Symbol | |
ID | 8417112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 3233204 |
End bp | 3234739 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645025761 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003183122 |
Protein GI | 257792516 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0490323 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAGCAAA GCTCATCGCG CATGCATGTG TCCAGTTGGG GCTACGCATG TTTTCTCACG GTGAACGCCA CGTCCATTTG GGGCGGTGTC TTCCCGTTTC TGCCGCTCGA ATTCCAGACG GCGGAGATCA CCCTCACGTT CTTCCTAGCC CAGGCGCTCG CGTTCGGCGG CGCGTTCGTA GCCAGCATGC TCGGATCGTA CTACTTTCCG CGCGGCGCGC GTGTGATGCT GGTGTCGCTG AGCGCGCTGT TGGTGTTCGC CGGGTCGGCC TGCCTTATCG CGGCCATGTA CGTGCAGGCG GCCACGCTCC CGCTGGTGTT CGCCGGTGGC GTGTTGCTGG GCATCGGGTG CGCGGGCATG TTCATGCTAT GGCAGCGCTA CTTCGCGTCG CTGCCGTCGG CCGAGGGCAA CTTGCGGCTC ATCGTGGGCA CGGCCATCGC GCCGCTCATC TACTTTGCGC TGTACCTCGT GCCCATCGCG CTGACGGCTT TCCTCATACC GCTCGTGTTC GTGCCCTTGT GCGGCCTTTG CATCGCGCTT TCGGTGCGCG AGATGCACGT GGACCAGCCT ATGTTCGAGG ACGTGCCGCA GCAGCATCCG CGCGTGTATC GGCAGGTGGT GGCCGACTAT TGGCGCAGTG CGCTGTGCGT GGGGTCGCTC GCGTTCGCCA GCGGCGTCAT CCGCGGCATC GCGCTTCTGC ACGAGGATAT CGGCGCAGTG GTGAACAGCG CGTCGATGCT GGGCTCGTTG GTGTCGGCGG TGGTGCTGTT GGTGCTGTGG TACCGCATGA GCTTCCGGTT CGGGCTGACC TCGGTGTTCC GTGTGGTGTA TCCGCTCATC ATCACGGGGT TCTTGCTGCT GCCGTTTTTG GGTGCGACCT ATCTCAACCT GTTCGCGGCG CTTACGTACA TGGTGTTCTC GCTAGTGCAG ATGCTCATGA TGATGCAGTG CGCGCAGATC TCGCGCGACC GCGGCATCAA CCCGGTGTTC ATCTACGGGT TCTTCGGCGG CGTGGCCTAC ATCATGCAGA GCGCCGGCTT CTTGCTGGGC TGGGTGAGCG ACTTCATGTG GATCGGCGGT CGCGAGTGGT TGTTCATCGT GGCCATGGTA TCGAGCTACG TGCTGGGCCT CACGCTGCTG GCGGCCACGG GCACGCTGTT CAAATCGCTG GCGGCGAAGG GCACGGTGAC GGCCGATCCC ATCGAGTTCC TGGCGGTCGG CGCGCCGGAG GAGCCGCGGC AGCAGAAGGC GGCGAAACCT GCGGCAAAGC GCCGACGGAA TCGCCCTTCG GCATCCGAAG ACGCGGGCGT CATCCGCGAT CGCACGTCGA AGCAATGTCT CATGCTGCAG GAGGCGCACG GGTTGTCGAC GCGCGAAACG GAGGTCATGG AGCTTATCGC GCGCGGGAAC AGCATGGCCG CCATCGCCGA GCGCCTGGTC ATCAGCGAGA ACACCGTGCG CACGCACGCG AAGCACATTT ACACGAAGCT CGACATCCAC CGTCGTCAAG AGCTGTTGGA CATGCTGCAT GAATGA
|
Protein sequence | MEQSSSRMHV SSWGYACFLT VNATSIWGGV FPFLPLEFQT AEITLTFFLA QALAFGGAFV ASMLGSYYFP RGARVMLVSL SALLVFAGSA CLIAAMYVQA ATLPLVFAGG VLLGIGCAGM FMLWQRYFAS LPSAEGNLRL IVGTAIAPLI YFALYLVPIA LTAFLIPLVF VPLCGLCIAL SVREMHVDQP MFEDVPQQHP RVYRQVVADY WRSALCVGSL AFASGVIRGI ALLHEDIGAV VNSASMLGSL VSAVVLLVLW YRMSFRFGLT SVFRVVYPLI ITGFLLLPFL GATYLNLFAA LTYMVFSLVQ MLMMMQCAQI SRDRGINPVF IYGFFGGVAY IMQSAGFLLG WVSDFMWIGG REWLFIVAMV SSYVLGLTLL AATGTLFKSL AAKGTVTADP IEFLAVGAPE EPRQQKAAKP AAKRRRNRPS ASEDAGVIRD RTSKQCLMLQ EAHGLSTRET EVMELIARGN SMAAIAERLV ISENTVRTHA KHIYTKLDIH RRQELLDMLH E
|
| |