More than 300 homologs were found in PanDaTox collection
for query gene Ccur_13460 on replicon NC_013170
Organism: Cryptobacterium curtum DSM 15641



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013170  Ccur_13460  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  100 
 
 
472 aa  953    Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1389  transcriptional regulator, LuxR family  31.46 
 
 
478 aa  176  6e-43  Eggerthella lenta DSM 2243  Bacteria  normal  0.544965  normal 
 
 
-
 
NC_013204  Elen_2108  transcriptional regulator, LuxR family  25 
 
 
516 aa  110  6e-23  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00926757  normal  0.183235 
 
 
-
 
NC_013204  Elen_0269  transcriptional regulator, LuxR family  27.53 
 
 
499 aa  106  7e-22  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2824  transcriptional regulator, LuxR family  24.18 
 
 
550 aa  106  9e-22  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2812  transcriptional regulator, LuxR family  26.49 
 
 
522 aa  98.2  3e-19  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.000674561  hitchhiker  0.0000653029 
 
 
-
 
NC_013204  Elen_0615  transcriptional regulator, LuxR family  27.13 
 
 
462 aa  84.7  0.000000000000003  Eggerthella lenta DSM 2243  Bacteria  unclonable  0.000000110739  normal 
 
 
-
 
NC_013204  Elen_0133  transcriptional regulator, LuxR family  28.34 
 
 
480 aa  81.6  0.00000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.384824 
 
 
-
 
NC_013204  Elen_0123  transcriptional regulator, LuxR family  32.09 
 
 
492 aa  77.8  0.0000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.891774  normal 
 
 
-
 
NC_013204  Elen_2655  transcriptional regulator, LuxR family  52.7 
 
 
470 aa  74.3  0.000000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.149331 
 
 
-
 
NC_013204  Elen_2723  transcriptional regulator, LuxR family  43.16 
 
 
509 aa  73.9  0.000000000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.397924  normal 
 
 
-
 
NC_013204  Elen_1592  transcriptional regulator, LuxR family  38.46 
 
 
518 aa  72.8  0.00000000001  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000355637 
 
 
-
 
NC_013204  Elen_2786  transcriptional regulator, LuxR family  38.38 
 
 
511 aa  72.8  0.00000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0490323 
 
 
-
 
NC_013204  Elen_3038  transcriptional regulator, LuxR family  43.55 
 
 
569 aa  71.2  0.00000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2532  transcriptional regulator, LuxR family  32.52 
 
 
500 aa  71.6  0.00000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_06810  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.85 
 
 
520 aa  71.2  0.00000000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.521043 
 
 
-
 
NC_013204  Elen_0496  transcriptional regulator, LuxR family  35.16 
 
 
510 aa  70.9  0.00000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.484054 
 
 
-
 
NC_013204  Elen_2699  transcriptional regulator, LuxR family  35.54 
 
 
478 aa  70.5  0.00000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0406  transcriptional regulator, LuxR family  35.24 
 
 
486 aa  70.5  0.00000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0269651 
 
 
-
 
NC_013204  Elen_0520  transcriptional regulator, LuxR family  38.89 
 
 
520 aa  70.5  0.00000000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.1412 
 
 
-
 
NC_013170  Ccur_12490  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  39.78 
 
 
560 aa  70.5  0.00000000007  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0440  transcriptional regulator, LuxR family  41.57 
 
 
526 aa  69.7  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0171  transcriptional regulator, LuxR family  47.46 
 
 
484 aa  69.3  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0597  transcriptional regulator, LuxR family  51.67 
 
 
493 aa  68.9  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.882562  normal 
 
 
-
 
NC_013204  Elen_2929  transcriptional regulator, LuxR family  40.86 
 
 
462 aa  68.6  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_03730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.13 
 
 
426 aa  68.6  0.0000000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.532687  normal 
 
 
-
 
NC_013170  Ccur_03610  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  56.36 
 
 
470 aa  68.9  0.0000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.166414  normal  0.0491532 
 
 
-
 
NC_013170  Ccur_13650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  37.36 
 
 
464 aa  68.6  0.0000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0392  transcriptional regulator, LuxR family  25.97 
 
 
529 aa  68.6  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0985  transcriptional regulator, LuxR family  29.17 
 
 
476 aa  68.2  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.880452 
 
 
-
 
NC_013204  Elen_0167  transcriptional regulator, LuxR family  52.63 
 
 
493 aa  68.2  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.165739  normal 
 
 
-
 
NC_013204  Elen_0506  transcriptional regulator, LuxR family  40 
 
 
519 aa  68.6  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.274884 
 
 
-
 
NC_013165  Shel_05580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.55 
 
 
512 aa  68.2  0.0000000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.735856  normal 
 
 
-
 
NC_013170  Ccur_01760  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  23.53 
 
 
546 aa  68.2  0.0000000003  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  0.0000265618 
 
 
-
 
NC_013170  Ccur_00480  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.28 
 
 
606 aa  68.2  0.0000000003  Cryptobacterium curtum DSM 15641  Bacteria  decreased coverage  0.00118843  normal 
 
 
-
 
NC_013204  Elen_0436  transcriptional regulator, LuxR family  33.61 
 
 
501 aa  67.4  0.0000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2775  transcriptional regulator, LuxR family  52.73 
 
 
481 aa  67  0.0000000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.257993  normal  0.934511 
 
 
-
 
NC_013204  Elen_0523  transcriptional regulator, LuxR family  37.62 
 
 
511 aa  67  0.0000000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.500884  normal  0.253762 
 
 
-
 
NC_013204  Elen_0630  transcriptional regulator, LuxR family  45 
 
 
528 aa  67  0.0000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2762  ATP-dependent transcriptional regulator, MalT- like, LuxR family  36.17 
 
 
520 aa  67  0.0000000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2816  transcriptional regulator, LuxR family  34.41 
 
 
471 aa  67  0.0000000007  Eggerthella lenta DSM 2243  Bacteria  normal  0.138304  hitchhiker  0.00338242 
 
 
-
 
NC_013204  Elen_0514  transcriptional regulator, LuxR family  47.37 
 
 
493 aa  67  0.0000000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.559597 
 
 
-
 
NC_013165  Shel_25010  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.91 
 
 
484 aa  66.6  0.0000000009  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1837  transcriptional regulator, LuxR family  50 
 
 
487 aa  66.2  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0421  transcriptional regulator, LuxR family  41.38 
 
 
552 aa  66.6  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.0413788  hitchhiker  0.00000000225621 
 
 
-
 
NC_013204  Elen_3022  ATP-dependent transcriptional regulator, MalT- like, LuxR family  46.55 
 
 
485 aa  66.2  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.709367  normal 
 
 
-
 
NC_013165  Shel_02650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.78 
 
 
505 aa  65.9  0.000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0368  transcriptional regulator, LuxR family  40.32 
 
 
516 aa  66.2  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_20840  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.88 
 
 
524 aa  65.5  0.000000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.982335  normal 
 
 
-
 
NC_013165  Shel_27360  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.24 
 
 
517 aa  65.9  0.000000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0445329  normal 
 
 
-
 
NC_013204  Elen_2932  transcriptional regulator, LuxR family  35.14 
 
 
492 aa  65.5  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0461  transcriptional regulator, LuxR family  45.61 
 
 
542 aa  65.5  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1093  transcriptional regulator, LuxR family  47.27 
 
 
505 aa  65.9  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.569375  hitchhiker  0.0000000000000377381 
 
 
-
 
NC_013204  Elen_0072  transcriptional regulator, LuxR family  45 
 
 
477 aa  64.7  0.000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.323936  normal 
 
 
-
 
NC_013204  Elen_2779  transcriptional regulator, LuxR family  46.55 
 
 
505 aa  64.7  0.000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.980405 
 
 
-
 
NC_013204  Elen_0976  transcriptional regulator, LuxR family  46.67 
 
 
501 aa  65.1  0.000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.018057 
 
 
-
 
NC_013204  Elen_2258  transcriptional regulator, LuxR family  34.52 
 
 
476 aa  65.1  0.000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0485  transcriptional regulator, LuxR family  50.91 
 
 
537 aa  64.3  0.000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.619389 
 
 
-
 
NC_013204  Elen_0445  transcriptional regulator, LuxR family  39.77 
 
 
534 aa  64.3  0.000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0892  ATP-dependent transcriptional regulator-like protein protein  35.59 
 
 
896 aa  64.3  0.000000005  Methylibium petroleiphilum PM1  Bacteria  normal  0.311866  normal 
 
 
-
 
NC_013204  Elen_2696  transcriptional regulator, LuxR family  50 
 
 
535 aa  63.9  0.000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0341  transcriptional regulator, LuxR family  43.33 
 
 
478 aa  63.9  0.000000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.953627  normal 
 
 
-
 
NC_013204  Elen_1015  transcriptional regulator, LuxR family  43.64 
 
 
509 aa  63.5  0.000000007  Eggerthella lenta DSM 2243  Bacteria  normal  0.221092  normal  0.129145 
 
 
-
 
NC_013165  Shel_23080  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.24 
 
 
545 aa  63.5  0.000000007  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.865531  normal 
 
 
-
 
NC_013170  Ccur_10150  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  41.54 
 
 
483 aa  63.5  0.000000009  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.906615  hitchhiker  0.00359447 
 
 
-
 
NC_013204  Elen_0989  transcriptional regulator, LuxR family  42.62 
 
 
499 aa  63.2  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0992  transcriptional regulator, LuxR family  36.67 
 
 
493 aa  63.2  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13550  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  45.76 
 
 
506 aa  62.8  0.00000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0617  transcriptional regulator, LuxR family  38.67 
 
 
505 aa  63.2  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.0935525  normal 
 
 
-
 
NC_013165  Shel_16610  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.44 
 
 
491 aa  62.4  0.00000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0119595  normal  0.714327 
 
 
-
 
NC_013204  Elen_2925  transcriptional regulator, LuxR family  42.37 
 
 
517 aa  62.4  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0289  transcriptional regulator, LuxR family  30.6 
 
 
498 aa  62  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.797409 
 
 
-
 
NC_013204  Elen_2693  transcriptional regulator, LuxR family  43.24 
 
 
80 aa  62  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0765  two component transcriptional regulator, LuxR family  45.71 
 
 
222 aa  61.6  0.00000003  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_26890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.11 
 
 
515 aa  61.6  0.00000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2688  transcriptional regulator, LuxR family  40.85 
 
 
470 aa  61.6  0.00000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  54.39 
 
 
206 aa  61.2  0.00000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00252848 
 
 
-
 
NC_013204  Elen_0108  transcriptional regulator, LuxR family  34.15 
 
 
493 aa  61.6  0.00000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.44109  normal 
 
 
-
 
NC_013204  Elen_1008  transcriptional regulator, LuxR family  36.56 
 
 
495 aa  61.2  0.00000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.831923  normal  0.0679507 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  46.55 
 
 
215 aa  61.2  0.00000004  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_013204  Elen_2290  transcriptional regulator, LuxR family  25 
 
 
493 aa  61.2  0.00000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.10968  normal 
 
 
-
 
NC_013204  Elen_0529  transcriptional regulator, LuxR family  37.7 
 
 
518 aa  60.8  0.00000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.401207  normal  0.573322 
 
 
-
 
NC_010002  Daci_4815  ATP-dependent transcription regulator LuxR  40.91 
 
 
924 aa  60.8  0.00000005  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  44.62 
 
 
238 aa  60.5  0.00000006  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  42.65 
 
 
227 aa  60.5  0.00000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2758  transcriptional regulator, LuxR family  35.42 
 
 
523 aa  60.5  0.00000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  52.83 
 
 
218 aa  60.8  0.00000006  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013204  Elen_0518  transcriptional regulator, LuxR family  40 
 
 
488 aa  60.5  0.00000007  Eggerthella lenta DSM 2243  Bacteria  normal  0.982453  normal  0.339001 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  45.61 
 
 
231 aa  60.5  0.00000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  48.28 
 
 
220 aa  60.5  0.00000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13370  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.5 
 
 
537 aa  60.1  0.00000008  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.925648  normal 
 
 
-
 
NC_013165  Shel_11580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50 
 
 
515 aa  60.1  0.00000008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.937657  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.17 
 
 
229 aa  60.1  0.00000008  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013165  Shel_13310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  40 
 
 
469 aa  60.1  0.00000009  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0175254  normal 
 
 
-
 
NC_007410  Ava_B0029  two component LuxR family transcriptional regulator  41.25 
 
 
220 aa  59.7  0.0000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.268532  n/a   
 
 
-
 
NC_013170  Ccur_08650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  29.67 
 
 
508 aa  59.7  0.0000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.197798  normal  0.463051 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  47.37 
 
 
241 aa  59.3  0.0000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013204  Elen_0473  transcriptional regulator, LuxR family  45.76 
 
 
488 aa  59.7  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.815594  normal 
 
 
-
 
NC_013165  Shel_12700  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.86 
 
 
488 aa  59.7  0.0000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  44.62 
 
 
250 aa  59.7  0.0000001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>