More than 300 homologs were found in PanDaTox collection
for query gene Shel_23080 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_23080  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
545 aa  1112    Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.865531  normal 
 
 
-
 
NC_013204  Elen_0167  transcriptional regulator, LuxR family  29.25 
 
 
493 aa  85.9  0.000000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.165739  normal 
 
 
-
 
NC_013204  Elen_0989  transcriptional regulator, LuxR family  26.22 
 
 
499 aa  84.7  0.000000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2353  transcriptional regulator, LuxR family  24.91 
 
 
516 aa  82  0.00000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2932  transcriptional regulator, LuxR family  28.39 
 
 
492 aa  75.1  0.000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0518  transcriptional regulator, LuxR family  31.54 
 
 
488 aa  74.7  0.000000000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.982453  normal  0.339001 
 
 
-
 
NC_013170  Ccur_13650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  25 
 
 
464 aa  74.3  0.000000000006  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13550  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  27.23 
 
 
506 aa  72.8  0.00000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1093  transcriptional regulator, LuxR family  47.22 
 
 
505 aa  71.6  0.00000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.569375  hitchhiker  0.0000000000000377381 
 
 
-
 
NC_013204  Elen_0436  transcriptional regulator, LuxR family  38 
 
 
501 aa  71.6  0.00000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_12490  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  49.33 
 
 
560 aa  70.9  0.00000000005  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_08650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  22.63 
 
 
508 aa  70.9  0.00000000006  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.197798  normal  0.463051 
 
 
-
 
NC_013204  Elen_0269  transcriptional regulator, LuxR family  36.7 
 
 
499 aa  70.5  0.00000000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_20840  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.23 
 
 
524 aa  69.7  0.0000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.982335  normal 
 
 
-
 
NC_013204  Elen_0392  transcriptional regulator, LuxR family  29.95 
 
 
529 aa  69.7  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2795  transcriptional regulator, LuxR family  30 
 
 
468 aa  70.1  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000289432 
 
 
-
 
NC_013204  Elen_3022  ATP-dependent transcriptional regulator, MalT- like, LuxR family  24.01 
 
 
485 aa  68.9  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.709367  normal 
 
 
-
 
NC_013204  Elen_0289  transcriptional regulator, LuxR family  29.13 
 
 
498 aa  68.9  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.797409 
 
 
-
 
NC_013204  Elen_2812  transcriptional regulator, LuxR family  47.22 
 
 
522 aa  68.9  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.000674561  hitchhiker  0.0000653029 
 
 
-
 
NC_013204  Elen_2114  transcriptional regulator, LuxR family  33.01 
 
 
191 aa  68.6  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  unclonable  0.00000000451621  normal  0.459179 
 
 
-
 
NC_013204  Elen_0597  transcriptional regulator, LuxR family  40.26 
 
 
493 aa  68.2  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.882562  normal 
 
 
-
 
NC_013204  Elen_0123  transcriptional regulator, LuxR family  29.44 
 
 
492 aa  68.2  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.891774  normal 
 
 
-
 
NC_013204  Elen_1903  transcriptional regulator, LuxR family  53.33 
 
 
196 aa  68.6  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000000231921 
 
 
-
 
NC_013204  Elen_0171  transcriptional regulator, LuxR family  26.11 
 
 
484 aa  68.2  0.0000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0496  transcriptional regulator, LuxR family  34.04 
 
 
510 aa  67.8  0.0000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.484054 
 
 
-
 
NC_013204  Elen_0617  transcriptional regulator, LuxR family  33.73 
 
 
505 aa  67.8  0.0000000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.0935525  normal 
 
 
-
 
NC_013204  Elen_2929  transcriptional regulator, LuxR family  43.06 
 
 
462 aa  67.8  0.0000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_25010  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.06 
 
 
484 aa  67  0.0000000009  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2816  transcriptional regulator, LuxR family  45.59 
 
 
471 aa  67  0.0000000009  Eggerthella lenta DSM 2243  Bacteria  normal  0.138304  hitchhiker  0.00338242 
 
 
-
 
NC_013204  Elen_0514  transcriptional regulator, LuxR family  30.3 
 
 
493 aa  66.2  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.559597 
 
 
-
 
NC_013204  Elen_0461  transcriptional regulator, LuxR family  33.04 
 
 
542 aa  66.6  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0531  transcriptional regulator, LuxR family  23.33 
 
 
529 aa  65.9  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.614613  normal  0.848046 
 
 
-
 
NC_013204  Elen_2655  transcriptional regulator, LuxR family  26.91 
 
 
470 aa  65.9  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.149331 
 
 
-
 
NC_013170  Ccur_03610  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.89 
 
 
470 aa  65.1  0.000000003  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.166414  normal  0.0491532 
 
 
-
 
NC_013204  Elen_0406  transcriptional regulator, LuxR family  29.78 
 
 
486 aa  64.7  0.000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0269651 
 
 
-
 
NC_013204  Elen_0506  transcriptional regulator, LuxR family  40 
 
 
519 aa  64.3  0.000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.274884 
 
 
-
 
NC_013204  Elen_1015  transcriptional regulator, LuxR family  40 
 
 
509 aa  64.7  0.000000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.221092  normal  0.129145 
 
 
-
 
NC_013170  Ccur_10150  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  25.93 
 
 
483 aa  64.3  0.000000005  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.906615  hitchhiker  0.00359447 
 
 
-
 
NC_013204  Elen_2775  transcriptional regulator, LuxR family  54.72 
 
 
481 aa  64.3  0.000000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.257993  normal  0.934511 
 
 
-
 
NC_013204  Elen_0606  transcriptional regulator, LuxR family  48.15 
 
 
506 aa  63.9  0.000000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.290399 
 
 
-
 
NC_013170  Ccur_13460  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  54.24 
 
 
472 aa  63.5  0.000000008  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_06100  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.6 
 
 
518 aa  63.9  0.000000008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.603093 
 
 
-
 
NC_013204  Elen_0421  transcriptional regulator, LuxR family  35 
 
 
552 aa  63.2  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.0413788  hitchhiker  0.00000000225621 
 
 
-
 
NC_013170  Ccur_01760  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  23.15 
 
 
546 aa  63.2  0.00000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  0.0000265618 
 
 
-
 
NC_013204  Elen_0529  transcriptional regulator, LuxR family  36.36 
 
 
518 aa  62.8  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.401207  normal  0.573322 
 
 
-
 
NC_013165  Shel_05580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  25.89 
 
 
512 aa  62.4  0.00000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.735856  normal 
 
 
-
 
NC_013165  Shel_02650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.44 
 
 
505 aa  62.8  0.00000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0615  transcriptional regulator, LuxR family  46.27 
 
 
462 aa  62.4  0.00000002  Eggerthella lenta DSM 2243  Bacteria  unclonable  0.000000110739  normal 
 
 
-
 
NC_013165  Shel_22730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.5 
 
 
502 aa  62.4  0.00000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2786  transcriptional regulator, LuxR family  28.74 
 
 
511 aa  62  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0490323 
 
 
-
 
NC_013165  Shel_13310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.27 
 
 
469 aa  62  0.00000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0175254  normal 
 
 
-
 
NC_013165  Shel_12700  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.88 
 
 
488 aa  62  0.00000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2723  transcriptional regulator, LuxR family  41.43 
 
 
509 aa  62  0.00000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.397924  normal 
 
 
-
 
NC_013204  Elen_2688  transcriptional regulator, LuxR family  50 
 
 
470 aa  62  0.00000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0108  transcriptional regulator, LuxR family  25.63 
 
 
493 aa  61.6  0.00000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.44109  normal 
 
 
-
 
NC_013204  Elen_0630  transcriptional regulator, LuxR family  22.62 
 
 
528 aa  61.2  0.00000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_26890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.62 
 
 
515 aa  61.2  0.00000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  60.78 
 
 
227 aa  61.2  0.00000005  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3217  ATP-dependent transcriptional regulator, MalT- like, LuxR family  45 
 
 
891 aa  60.8  0.00000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  decreased coverage  0.000000769208 
 
 
-
 
NC_013204  Elen_0523  transcriptional regulator, LuxR family  44.26 
 
 
511 aa  60.8  0.00000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.500884  normal  0.253762 
 
 
-
 
NC_013204  Elen_0992  transcriptional regulator, LuxR family  40 
 
 
493 aa  60.5  0.00000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2108  transcriptional regulator, LuxR family  40 
 
 
516 aa  60.5  0.00000007  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00926757  normal  0.183235 
 
 
-
 
NC_013204  Elen_2925  transcriptional regulator, LuxR family  37.8 
 
 
517 aa  60.8  0.00000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2696  transcriptional regulator, LuxR family  42.86 
 
 
535 aa  60.5  0.00000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0500  transcriptional regulator, LuxR family  23.19 
 
 
487 aa  60.1  0.00000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.472786 
 
 
-
 
NC_013204  Elen_0184  transcriptional regulator, LuxR family  47.54 
 
 
507 aa  59.7  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.131926  normal 
 
 
-
 
NC_013165  Shel_23170  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.68 
 
 
474 aa  60.1  0.0000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.23412 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  49.15 
 
 
210 aa  59.7  0.0000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013204  Elen_1008  transcriptional regulator, LuxR family  33.75 
 
 
495 aa  58.5  0.0000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.831923  normal  0.0679507 
 
 
-
 
NC_013204  Elen_2762  ATP-dependent transcriptional regulator, MalT- like, LuxR family  42.42 
 
 
520 aa  58.5  0.0000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0976  transcriptional regulator, LuxR family  52.94 
 
 
501 aa  58.2  0.0000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.018057 
 
 
-
 
NC_013165  Shel_06810  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.14 
 
 
520 aa  58.2  0.0000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.521043 
 
 
-
 
NC_013204  Elen_0133  transcriptional regulator, LuxR family  36.73 
 
 
480 aa  58.2  0.0000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.384824 
 
 
-
 
NC_013204  Elen_0485  transcriptional regulator, LuxR family  50.91 
 
 
537 aa  58.2  0.0000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.619389 
 
 
-
 
NC_013204  Elen_0473  transcriptional regulator, LuxR family  34.17 
 
 
488 aa  57.8  0.0000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.815594  normal 
 
 
-
 
NC_013170  Ccur_13370  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.64 
 
 
537 aa  57.8  0.0000005  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.925648  normal 
 
 
-
 
NC_008148  Rxyl_3188  LuxR family transcriptional regulator  47.37 
 
 
368 aa  57.8  0.0000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0110301  n/a   
 
 
-
 
NC_013204  Elen_2824  transcriptional regulator, LuxR family  47.27 
 
 
550 aa  57.8  0.0000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_00820  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.44 
 
 
320 aa  57.8  0.0000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0072  transcriptional regulator, LuxR family  44.44 
 
 
477 aa  57.8  0.0000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.323936  normal 
 
 
-
 
NC_013165  Shel_03730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  40.96 
 
 
426 aa  57.4  0.0000007  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.532687  normal 
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  41.46 
 
 
230 aa  57.4  0.0000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_27360  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.09 
 
 
517 aa  57  0.0000009  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0445329  normal 
 
 
-
 
NC_013204  Elen_2258  transcriptional regulator, LuxR family  22.22 
 
 
476 aa  56.2  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0602  transcriptional regulator, LuxR family protein  28.35 
 
 
210 aa  56.2  0.000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.126322  n/a   
 
 
-
 
NC_013204  Elen_1837  transcriptional regulator, LuxR family  35.53 
 
 
487 aa  56.2  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0368  transcriptional regulator, LuxR family  41.38 
 
 
516 aa  56.6  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0520  transcriptional regulator, LuxR family  42.86 
 
 
520 aa  56.2  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.1412 
 
 
-
 
NC_013204  Elen_3038  transcriptional regulator, LuxR family  36.23 
 
 
569 aa  55.8  0.000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2290  transcriptional regulator, LuxR family  27.97 
 
 
493 aa  55.5  0.000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.10968  normal 
 
 
-
 
NC_013739  Cwoe_5287  transcriptional regulator, LuxR family  51.85 
 
 
206 aa  55.5  0.000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2699  transcriptional regulator, LuxR family  25.32 
 
 
478 aa  55.8  0.000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1037  transcriptional regulator, LuxR family  51.72 
 
 
363 aa  55.1  0.000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.760351 
 
 
-
 
NC_013165  Shel_24540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.95 
 
 
536 aa  55.5  0.000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2779  transcriptional regulator, LuxR family  41.38 
 
 
505 aa  55.1  0.000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.980405 
 
 
-
 
NC_013204  Elen_1389  transcriptional regulator, LuxR family  37.14 
 
 
478 aa  55.5  0.000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.544965  normal 
 
 
-
 
NC_013411  GYMC61_1243  transcriptional regulator, LuxR family  45 
 
 
550 aa  55.5  0.000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013204  Elen_2532  transcriptional regulator, LuxR family  41.94 
 
 
500 aa  55.1  0.000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  45.9 
 
 
210 aa  54.7  0.000004  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  45.9 
 
 
210 aa  55.1  0.000004  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
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