More than 300 homologs were found in PanDaTox collection
for query gene Shel_02650 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_02650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
505 aa  1021    Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0989  transcriptional regulator, LuxR family  24.15 
 
 
499 aa  97.8  5e-19  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13550  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  25.87 
 
 
506 aa  95.5  2e-18  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0473  transcriptional regulator, LuxR family  28.03 
 
 
488 aa  92.4  2e-17  Eggerthella lenta DSM 2243  Bacteria  normal  0.815594  normal 
 
 
-
 
NC_013204  Elen_3022  ATP-dependent transcriptional regulator, MalT- like, LuxR family  28.92 
 
 
485 aa  88.6  3e-16  Eggerthella lenta DSM 2243  Bacteria  normal  0.709367  normal 
 
 
-
 
NC_013204  Elen_2353  transcriptional regulator, LuxR family  29.1 
 
 
516 aa  84  0.000000000000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0531  transcriptional regulator, LuxR family  27.49 
 
 
529 aa  82  0.00000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.614613  normal  0.848046 
 
 
-
 
NC_013165  Shel_25010  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  26.45 
 
 
484 aa  80.9  0.00000000000005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0985  transcriptional regulator, LuxR family  27.64 
 
 
476 aa  79.3  0.0000000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.880452 
 
 
-
 
NC_013165  Shel_06810  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  25.17 
 
 
520 aa  78.2  0.0000000000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.521043 
 
 
-
 
NC_013165  Shel_27360  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  27.71 
 
 
517 aa  77.4  0.0000000000005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0445329  normal 
 
 
-
 
NC_013204  Elen_1837  transcriptional regulator, LuxR family  43.84 
 
 
487 aa  77  0.0000000000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2812  transcriptional regulator, LuxR family  42.86 
 
 
522 aa  77  0.0000000000008  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.000674561  hitchhiker  0.0000653029 
 
 
-
 
NC_013204  Elen_0421  transcriptional regulator, LuxR family  23.1 
 
 
552 aa  75.9  0.000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.0413788  hitchhiker  0.00000000225621 
 
 
-
 
NC_013204  Elen_0108  transcriptional regulator, LuxR family  47.14 
 
 
493 aa  75.5  0.000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.44109  normal 
 
 
-
 
NC_013204  Elen_0167  transcriptional regulator, LuxR family  26.64 
 
 
493 aa  73.9  0.000000000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.165739  normal 
 
 
-
 
NC_013204  Elen_0615  transcriptional regulator, LuxR family  43.94 
 
 
462 aa  73.6  0.000000000007  Eggerthella lenta DSM 2243  Bacteria  unclonable  0.000000110739  normal 
 
 
-
 
NC_013170  Ccur_10150  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.06 
 
 
483 aa  73.6  0.000000000009  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.906615  hitchhiker  0.00359447 
 
 
-
 
NC_013204  Elen_2786  transcriptional regulator, LuxR family  25.9 
 
 
511 aa  73.2  0.00000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0490323 
 
 
-
 
NC_013170  Ccur_03610  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  28.23 
 
 
470 aa  72.4  0.00000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.166414  normal  0.0491532 
 
 
-
 
NC_013204  Elen_0500  transcriptional regulator, LuxR family  43.94 
 
 
487 aa  72  0.00000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.472786 
 
 
-
 
NC_013204  Elen_0269  transcriptional regulator, LuxR family  45.07 
 
 
499 aa  71.6  0.00000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0072  transcriptional regulator, LuxR family  26.74 
 
 
477 aa  71.6  0.00000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.323936  normal 
 
 
-
 
NC_013204  Elen_1093  transcriptional regulator, LuxR family  44.29 
 
 
505 aa  70.5  0.00000000007  Eggerthella lenta DSM 2243  Bacteria  normal  0.569375  hitchhiker  0.0000000000000377381 
 
 
-
 
NC_013204  Elen_0514  transcriptional regulator, LuxR family  29.29 
 
 
493 aa  69.3  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.559597 
 
 
-
 
NC_013204  Elen_0440  transcriptional regulator, LuxR family  24.57 
 
 
526 aa  69.3  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2114  transcriptional regulator, LuxR family  41.18 
 
 
191 aa  69.3  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  unclonable  0.00000000451621  normal  0.459179 
 
 
-
 
NC_013204  Elen_2779  transcriptional regulator, LuxR family  25.83 
 
 
505 aa  68.9  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.980405 
 
 
-
 
NC_013165  Shel_24540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  25.52 
 
 
536 aa  68.6  0.0000000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0133  transcriptional regulator, LuxR family  28.02 
 
 
480 aa  69.3  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.384824 
 
 
-
 
NC_013204  Elen_1015  transcriptional regulator, LuxR family  43.66 
 
 
509 aa  68.9  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.221092  normal  0.129145 
 
 
-
 
NC_013204  Elen_2929  transcriptional regulator, LuxR family  33.05 
 
 
462 aa  68.2  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_16610  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.33 
 
 
491 aa  68.6  0.0000000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0119595  normal  0.714327 
 
 
-
 
NC_013204  Elen_3038  transcriptional regulator, LuxR family  43.28 
 
 
569 aa  67.8  0.0000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_22730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  23.64 
 
 
502 aa  68.2  0.0000000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0392  transcriptional regulator, LuxR family  32.43 
 
 
529 aa  67.4  0.0000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_08650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  30.84 
 
 
508 aa  66.6  0.000000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.197798  normal  0.463051 
 
 
-
 
NC_013204  Elen_0436  transcriptional regulator, LuxR family  34.26 
 
 
501 aa  66.2  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0364  transcriptional regulator, LuxR family  31.58 
 
 
494 aa  65.9  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.723912 
 
 
-
 
NC_013204  Elen_2723  transcriptional regulator, LuxR family  29.52 
 
 
509 aa  65.5  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.397924  normal 
 
 
-
 
NC_013204  Elen_2762  ATP-dependent transcriptional regulator, MalT- like, LuxR family  27.01 
 
 
520 aa  65.5  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_12700  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  28.31 
 
 
488 aa  65.9  0.000000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01760  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  25.21 
 
 
546 aa  65.9  0.000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  0.0000265618 
 
 
-
 
NC_013170  Ccur_13460  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.78 
 
 
472 aa  65.9  0.000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_23170  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.34 
 
 
474 aa  65.1  0.000000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.23412 
 
 
-
 
NC_013204  Elen_0171  transcriptional regulator, LuxR family  26.03 
 
 
484 aa  65.1  0.000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0184  transcriptional regulator, LuxR family  33.58 
 
 
507 aa  65.1  0.000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.131926  normal 
 
 
-
 
NC_013204  Elen_0368  transcriptional regulator, LuxR family  24.43 
 
 
516 aa  65.1  0.000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_03730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  27.27 
 
 
426 aa  64.3  0.000000005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.532687  normal 
 
 
-
 
NC_013204  Elen_0341  transcriptional regulator, LuxR family  24.88 
 
 
478 aa  64.3  0.000000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.953627  normal 
 
 
-
 
NC_013165  Shel_20840  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.88 
 
 
524 aa  63.9  0.000000007  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.982335  normal 
 
 
-
 
NC_013204  Elen_0496  transcriptional regulator, LuxR family  25.17 
 
 
510 aa  63.9  0.000000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.484054 
 
 
-
 
NC_013204  Elen_0506  transcriptional regulator, LuxR family  35.05 
 
 
519 aa  63.5  0.000000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.274884 
 
 
-
 
NC_013204  Elen_2699  transcriptional regulator, LuxR family  35.16 
 
 
478 aa  62.8  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1903  transcriptional regulator, LuxR family  46.67 
 
 
196 aa  62.8  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000000231921 
 
 
-
 
NC_013204  Elen_2532  transcriptional regulator, LuxR family  24.55 
 
 
500 aa  62.8  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0578  transcriptional regulator, LuxR family  38.89 
 
 
474 aa  62.4  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.28219  normal 
 
 
-
 
NC_013170  Ccur_13650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  26.32 
 
 
464 aa  62.8  0.00000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_23080  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.44 
 
 
545 aa  62.8  0.00000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.865531  normal 
 
 
-
 
NC_013204  Elen_2108  transcriptional regulator, LuxR family  35.56 
 
 
516 aa  62.4  0.00000002  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00926757  normal  0.183235 
 
 
-
 
NC_013204  Elen_0617  transcriptional regulator, LuxR family  24.26 
 
 
505 aa  61.6  0.00000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.0935525  normal 
 
 
-
 
NC_013165  Shel_12520  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.42 
 
 
320 aa  61.2  0.00000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.816981 
 
 
-
 
NC_008609  Ppro_2317  LuxR family transcriptional regulator  44.44 
 
 
201 aa  61.2  0.00000004  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00000209491  n/a   
 
 
-
 
NC_013204  Elen_1389  transcriptional regulator, LuxR family  39.44 
 
 
478 aa  60.8  0.00000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.544965  normal 
 
 
-
 
NC_013170  Ccur_12490  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  24.62 
 
 
560 aa  60.8  0.00000006  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0971  transcriptional regulator, LuxR family  43.75 
 
 
313 aa  60.5  0.00000007  Eggerthella lenta DSM 2243  Bacteria  normal  0.16732  hitchhiker  0.00115778 
 
 
-
 
NC_008255  CHU_1181  response regulator, positive activator of uhpT transcription  32.53 
 
 
318 aa  60.5  0.00000008  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.0000000041551  decreased coverage  0.008996 
 
 
-
 
NC_013204  Elen_1431  transcriptional regulator, LuxR family  39.24 
 
 
498 aa  59.3  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.0577596  normal  0.857351 
 
 
-
 
NC_013204  Elen_1008  transcriptional regulator, LuxR family  40.91 
 
 
495 aa  60.1  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.831923  normal  0.0679507 
 
 
-
 
NC_013204  Elen_0157  transcriptional regulator, LuxR family  35.11 
 
 
321 aa  58.9  0.0000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_02050  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.24 
 
 
541 aa  58.9  0.0000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  50 
 
 
226 aa  58.9  0.0000002  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_013204  Elen_0209  transcriptional regulator, LuxR family  25.1 
 
 
487 aa  58.9  0.0000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.213353  normal  0.452607 
 
 
-
 
NC_013204  Elen_0489  transcriptional regulator, LuxR family  39.24 
 
 
468 aa  58.5  0.0000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.257042 
 
 
-
 
NC_007492  Pfl01_4706  ATP-dependent transcription regulator LuxR  49.25 
 
 
911 aa  58.5  0.0000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.157543 
 
 
-
 
NC_013165  Shel_06100  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.68 
 
 
518 aa  58.5  0.0000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.603093 
 
 
-
 
NC_013204  Elen_0461  transcriptional regulator, LuxR family  26.21 
 
 
542 aa  58.5  0.0000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  50 
 
 
230 aa  58.2  0.0000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2775  transcriptional regulator, LuxR family  36.59 
 
 
481 aa  58.5  0.0000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.257993  normal  0.934511 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  39.6 
 
 
213 aa  58.2  0.0000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_013204  Elen_2795  transcriptional regulator, LuxR family  40.3 
 
 
468 aa  58.2  0.0000004  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000289432 
 
 
-
 
NC_013204  Elen_0123  transcriptional regulator, LuxR family  34.33 
 
 
492 aa  57.8  0.0000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.891774  normal 
 
 
-
 
NC_013170  Ccur_13370  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  38.16 
 
 
537 aa  57.8  0.0000005  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.925648  normal 
 
 
-
 
NC_008726  Mvan_0349  response regulator receiver protein  43.08 
 
 
392 aa  57.8  0.0000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.83845 
 
 
-
 
NC_013165  Shel_11580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.72 
 
 
515 aa  57.4  0.0000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.937657  normal 
 
 
-
 
NC_013204  Elen_2655  transcriptional regulator, LuxR family  23.32 
 
 
470 aa  57.4  0.0000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.149331 
 
 
-
 
NC_013204  Elen_0976  transcriptional regulator, LuxR family  46 
 
 
501 aa  57.4  0.0000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.018057 
 
 
-
 
NC_013204  Elen_1291  transcriptional regulator, LuxR family  41.54 
 
 
300 aa  57  0.0000007  Eggerthella lenta DSM 2243  Bacteria  normal  0.979242  normal 
 
 
-
 
NC_013204  Elen_2758  transcriptional regulator, LuxR family  31.19 
 
 
523 aa  57  0.0000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0882  LuxR family transcriptional regulator  38.95 
 
 
253 aa  57.4  0.0000007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0992  transcriptional regulator, LuxR family  36.23 
 
 
493 aa  57  0.0000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2932  transcriptional regulator, LuxR family  33.33 
 
 
492 aa  57  0.0000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0630  transcriptional regulator, LuxR family  32.86 
 
 
528 aa  57  0.0000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_1584  regulatory protein, LuxR  50 
 
 
916 aa  57  0.0000007  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5233  two component transcriptional regulator, LuxR family  49.06 
 
 
223 aa  57.4  0.0000007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114456  hitchhiker  0.000738291 
 
 
-
 
NC_013204  Elen_0597  transcriptional regulator, LuxR family  40.62 
 
 
493 aa  57.4  0.0000007  Eggerthella lenta DSM 2243  Bacteria  normal  0.882562  normal 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  58 
 
 
261 aa  57  0.0000008  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013204  Elen_1592  transcriptional regulator, LuxR family  27.89 
 
 
518 aa  57  0.0000008  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000355637 
 
 
-
 
NC_013204  Elen_2258  transcriptional regulator, LuxR family  35.62 
 
 
476 aa  57  0.0000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_3443  transcriptional regulator, LuxR family  30.84 
 
 
335 aa  57  0.0000008  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00126305  n/a   
 
 
-
 
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