| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_02650 |
|---|
| Symbol | |
|---|
| ID | 8394157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 320787 |
|---|
| End bp | 322304 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644985036 |
|---|
| Product | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| Protein accession | YP_003142682 |
|---|
| Protein GI | 257063010 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAATC ATCCCCAAGG CATCTATCCG AAACGGTCCC TTGCCGTCGT CATCGGCGGA
CTTGCCGCAT ACCTTTCCTG GGGGTTCGTG TACTTCCAGG TCGTTGGCAA TGCAAGCGCC
ACCGACCTGG TCTTTTTCGC GAACCGGCTG GCACTTATCG CCAGCTACGC CGGATTCATG
GTCCTGGCCG TGTTCTTCTC GCGCATGCTG GTGCCGCTGC GACCGTCGAA CAACATCACG
TTTCTGACGC TGGCCGTGGT GGGCGTTTTT CTTGCCGGAT TCTCATACGC GGCTCCCGGG
TTCGCCGCGT TCTTGAGCCT TGCCGGTTCG CTGCTGGTGG GCGTGCAGTA CGGATGGTTC
CTTCTGTATT GGTGCGAACT GTTCGGCTAC GCGCAAACCC GCTGCGCCGG ATTCTGCTTC
GGGGCGGCCA TGCTGCTTGT CCCCGCCGTG TGCTATGCGG CCTTCGTTCT GCCCGATGTG
CTGCAGGTGT TCGCCGCCGC CCTGCTTCCC GTCCTTTCCT ATCTGGGGTT CCTGCACGGC
ATGAACGTCA TTTCCGAAAA CGGCCGGTTT AAGGATATGG ACAAACGGAT CGGCAAGCTG
CAGCTCAACG TGGATTCGCC CCGCTTCCCG TGGCGCACCT CCGAGCTGTT CGGCATCCTG
AAGGCCGCCA TCATGACGTC GGCCTTGTTC GGGTTCGTGT TCGGCGTTGT GGACGCAGGG
TTCGGCAAGC TGTATTACTG GGCCGTCGGA TTCGGCATCG TGGGCCTGGT GGTCACAATG
CTTTTGGCCC TGCGCCCGAA ACGGCTTTCG ATCCGTTTTC TGTACCGCCT GTCGCAACCC
GTCATGGTTT TCGGGCTTAT GGCATTGGGA TTCAGCACGG CATTGGGCGG CGTGCTGGTT
TCCACGGCGT TTTCCATCGA GCTGCTGCTG TTGGTGGTCA CGCTGTGCGA AACCGCCAAC
CGTTTCGAGA CGTCCGTGGT GCGCTTGGGC GGCTTCGCCT TCAGCTGTAC CATGATCAGC
TCGGCCGCAG GACGCGTCGT GGGAAAAACC GTCATGGATG CCGCCGCAGG CTCGAGCTTC
TTCGCCATGG CGCTTGTTGC CGCTATGACC TGCCTGTTCG TGCTGTATAC CGCGTTTACG
CCCGAGGACG GCGGGTTTTT GTTCGAATTC TCCGACCGCA CCAAGTCCGA TGGTGACGTC
TCCCCCACCG TGGCCGACCG CATGCGCGAC CCCGACCCCC GCGACATGGA GGTCAGCGTG
GTCATATTCC ACGAGGCGGT CAACCGCCGC TGCGCCGACG TGGCCGGCGA GTACGGACTT
TCCAACCGTG AGGAAGAGGT GCTGGTGCAC ATCATGCAGG GCAACAGCAT TCAGGAAGTC
GCCGACAAGC TGTTCATTTC GCCCGGCACC GTGAAGACCC ACATCAACCA TATCTATCGG
AAGATGGGCG TCACCCGTCG CTACGAGCTG AAACGAATCG TCAATTTGGA GCAGAAGGGC
ACCCCGCCGC TGGTCTGA
|
|---|
| Protein sequence | MTNHPQGIYP KRSLAVVIGG LAAYLSWGFV YFQVVGNASA TDLVFFANRL ALIASYAGFM
VLAVFFSRML VPLRPSNNIT FLTLAVVGVF LAGFSYAAPG FAAFLSLAGS LLVGVQYGWF
LLYWCELFGY AQTRCAGFCF GAAMLLVPAV CYAAFVLPDV LQVFAAALLP VLSYLGFLHG
MNVISENGRF KDMDKRIGKL QLNVDSPRFP WRTSELFGIL KAAIMTSALF GFVFGVVDAG
FGKLYYWAVG FGIVGLVVTM LLALRPKRLS IRFLYRLSQP VMVFGLMALG FSTALGGVLV
STAFSIELLL LVVTLCETAN RFETSVVRLG GFAFSCTMIS SAAGRVVGKT VMDAAAGSSF
FAMALVAAMT CLFVLYTAFT PEDGGFLFEF SDRTKSDGDV SPTVADRMRD PDPRDMEVSV
VIFHEAVNRR CADVAGEYGL SNREEEVLVH IMQGNSIQEV ADKLFISPGT VKTHINHIYR
KMGVTRRYEL KRIVNLEQKG TPPLV
|
|---|
| |