Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0976 |
Symbol | |
ID | 8415266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 1182726 |
End bp | 1184231 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645023940 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003181337 |
Protein GI | 257790731 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.018057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCATAG TGAAAGCTCA AACGCTGCTG CGGTCGCTGC GGTGGTACCA CGTCGGCTTC GCCTTCGTGT GGGCCATCAT GTTCGGCGGC CTGGCGGCGC CGTACGCCGG GTCGTCGGAA ACGTACGACC TGTACAGCAC GTGCCAGCAG GCGTGCGTCA TCGTCGCGGT GCTCGCGGCG GTGCTCGTCG AGCGGCGGGC ACCCGTCTTC TCGCCGCGCT ACGCGCTTCC CGCCGGCGCG ATTCTGGCGT TGGGCGCCCT CGCGTTTCGC ATCGTTTTCT TCGCCGGGCA GCCCACGGTG GGCGGTGCGG CGCTCGCCGG CGTGCTGCTC GGGTTGGCGG CCGGTTTCTT CTACGTGTCG TGGCAGCAGT TCTTCGCGTC CGAAGGCGCG TCGCGCACGG CGATCTACAT CCCCCTGTCG GCGGTTCTGT CGGTGGCGCT GAGCGTTGCG CTGCATGCGC TGCCCGAGGT CGCGCAGGCG GTGTGCACGA TCGCGGTGCT GCCCGTCGCC GCAGCCGCGT CGCTGAAGTT GAGCCTGCGC GAGATCATCG CCCCCGATCC GTCGCCGCGC ATGACGAAGG CGCTTGCAGC GGCCACCGTG CGGGATCTGT GGAAGCCGGT GTTCTGCACC TGCGCCATCG GGTTCGTGTG GCAGCTCGTG GCGGGGCTGT TCATGGTGTC GGCCGACGCG TCGTCGGCGG CGGGCATCGG CGGGCTGGCG CTGGCCGCGG CCGTGGTGCT GCTCATCGAG CTGTTCTCGG AGCGCGGTTT CGAAGTGCTG CGCGTCTACC AGGTGTTGTT TCCCCTTGTT GCCGGCGTGT TCATGCTGCC GTCGTTGCTG GGCGTGCAGT TCGCCCCGCT CGTGGTGGGC ATGCTGCTGT TCGGCTTCGA GATACTGAAC CTGCTGCTCA TCGTCACGTG CGCGGTGTAT TCGAGCGAGC GCAACGCGCC GGCGGTGCAG GTGTACGCGC TGTGCGTGGG CCCCACGCTG GCGGCCATGT TCGCCGGCGA CCTGCTGGGC CGGCAGCTCA ACCCCATCAT CGCCTACGAT TTCGCCTTGG CCGTGAACGT GCTGTTCCTG TGCGTGTACG CGCTGTCGAT GGTGCTGTTT CTCGTGTCGT TCCGCCGACG CGGGCGCGCC TCCGGAGCCG CGAGCGCGCA GGGTGCGGCG CCCATCGACG TGGCCGTGGT GGGCGGCAGC CAGCCGCTCG CCGTCGTGGA CGCGGTTTCG GTCGCCCCCG TGCCGAACGC TCCCGCCCCC GCGGCGGCAG CTGGCGAGCC CGACGATGCC GCGCGATGGG ATGCGCGCGT CGACGCGCTC GGCTTGGTCG AGCCGTTCAG CAAGCGCGAG CGCGAGGTGG TGGCGCTCGT GTTGCGCGGC AACAACGTGC CGGCCATCGC GCGCAAGCTC TACATTTCCG AGAACACCGT GCGCGACCAT ATGAAGAGCA TCTATCGCAA GGCCGGCATC CACTCGCGCC AGGAACTCAT CGACCTGTTC GAATAG
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Protein sequence | MSIVKAQTLL RSLRWYHVGF AFVWAIMFGG LAAPYAGSSE TYDLYSTCQQ ACVIVAVLAA VLVERRAPVF SPRYALPAGA ILALGALAFR IVFFAGQPTV GGAALAGVLL GLAAGFFYVS WQQFFASEGA SRTAIYIPLS AVLSVALSVA LHALPEVAQA VCTIAVLPVA AAASLKLSLR EIIAPDPSPR MTKALAAATV RDLWKPVFCT CAIGFVWQLV AGLFMVSADA SSAAGIGGLA LAAAVVLLIE LFSERGFEVL RVYQVLFPLV AGVFMLPSLL GVQFAPLVVG MLLFGFEILN LLLIVTCAVY SSERNAPAVQ VYALCVGPTL AAMFAGDLLG RQLNPIIAYD FALAVNVLFL CVYALSMVLF LVSFRRRGRA SGAASAQGAA PIDVAVVGGS QPLAVVDAVS VAPVPNAPAP AAAAGEPDDA ARWDARVDAL GLVEPFSKRE REVVALVLRG NNVPAIARKL YISENTVRDH MKSIYRKAGI HSRQELIDLF E
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