| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0844 |
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| Symbol | |
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| ID | 8367263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1007418 |
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| End bp | 1008122 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644983270 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003140961 |
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| Protein GI | 256819682 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACCT CAGCCTCTAT GGAATTCTTA GCACAGAAGT ATATCCCTTA TGCCAAAATG
CTAGCAAAAA TAGGGAATAA TGCCGTTTTT ATAGTAGATA AAAACGAGCA TTTCTATTTT
ATTTCCGATA AGTTTAAACT CTTTGGTTAC GACGATATTC CTAAGAATGA CAGTAGTGAA
ATGCAAGATT ATCCGCTAAA ACGACGCATT CACCCCGATG ATTTGGCGAT GAAAGAGCTC
ATAGATGAGA AGATTTACGA GTTTCTATCG TCCTTACCCA AAGAAGAACA AGTGCAGTAC
AAATACATTT ACGACTATCG CGGAATGGCA ACCGATGGCA CTTATGGGCG CGTGACTAAC
GAGGTGCAAC TATTAGAAGT TACTGACGAT AATTACCTCG CCTTAGGCAT TATAGAAATT
GCCCCTGACC AATCGGAGAA CTTGCCGGTA AGGGTGCAAA TGAAACACTG TATCACAGGG
GAGATTATCC CCATAAAAAT AGAAGAGGAA GATTTTGTGC TTACCCCGCG AGAAAAGGAA
ATACTCACAC TTGCCTCGCA AGGCTTTTCG AGCAAAGAAA TAGCTGAACA GTTATTCATC
AGCACTTACA CAGTGAATAG GCACCGGCAA AATATACGGG AAAAATTCAA TGTCGAAAGC
CTTATAGAAG CAATTGATTT AGCAAGAAGG AAAGGAATAT TGTGA
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| Protein sequence | MSTSASMEFL AQKYIPYAKM LAKIGNNAVF IVDKNEHFYF ISDKFKLFGY DDIPKNDSSE
MQDYPLKRRI HPDDLAMKEL IDEKIYEFLS SLPKEEQVQY KYIYDYRGMA TDGTYGRVTN
EVQLLEVTDD NYLALGIIEI APDQSENLPV RVQMKHCITG EIIPIKIEEE DFVLTPREKE
ILTLASQGFS SKEIAEQLFI STYTVNRHRQ NIREKFNVES LIEAIDLARR KGIL
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