Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_06100 |
Symbol | |
ID | 8394502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 711706 |
End bp | 713262 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644985372 |
Product | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
Protein accession | YP_003143018 |
Protein GI | 257063346 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.603093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAG TAGAAGCCCA AAAGGCCTTT TCGGAGGCAT ATGCGAAAGC GCGCAGCATG GACGAGGCGG CGCTTTCGCA CCCGTCTATG GACAAGGATC CTGTTACGTG GACGGAAGTC ATCAGGAGTT TTCATTTCAA GCGTCTTAAG GAAGATGCCG GGCTTGTCGG CGCCTTGGGA TTCGGATGCA TTCAGGCGTG GTTGTTCCTG TCGTGCTTCG CGCCTTCGCG CTTTATGGGA AGCATCTGGG TAGGAGAGTA CAGCGCTATG CGCCAGTTGA TGACGTTCGC CTGCTATTTG CTGACGTCGT GCCTGTTCGC AGAGGTTATT ACGGCGCGAA AGCCCATGGT GCAAGCTTCG GTTCTGACGA TTGCGGCGGC GTTGGCGTCG TTGTCGCTTT CCGGTTCGCT CTTCGCGGGC GCAGGGTCGG AAGTCATCGG CGCTTTGGCA AACGTAAAAT GCATCTTGTC CGGTTCCGCC ATGGGCTATT GCCTGGCTTT ATGGGCCCGC CACTATGCGG CCACCGGCAA CCACGAAACG CTCCGCATAG GAGAAGGCCT GATGACGTCC GTTCTGGTGG TCGCGGTCTG CCTGTTGGGT TCGAGGTTCG GCATCGTGTC GAGCGTCGTG CTGCCTCTGG TGACCTTGGG TTGTTTGCAT TGGGGCCTTC GGCTGAGCCG CAATGCCGCG AAACCTCCTG TGCAAGAGAA GCCCGCATCC AAGAACGACG TGCCCATGCC GCCGTTGCCG TGGCGCCTGA TGCTGGGGTT GATCGCCCTC GGGTTGGGGT ACGGCTTGTG TTTGGGCTAT TCGGAATCCA CGGGAAGCTA CCCCCCATCC ATCGTGTCGG TATGCTTGGC GGTCAATGCG CTTGTCGGCG GCATCTTGGT TGTGTACGCG GTGCAGACGG GCAGCAATTT CGGATACTCG GATGCGTGTG CCGTCGTTCT TCCCCTGGCT GTATTCGGGC AATGCTGGAT TTCGACGTTC CAAAACGAAC TGCTTCCGGT TGCTGCGGCC GCGATGCGCG CCGCTTTCTT GCTGTTCGAT TGCCTGCTGT GGCTCCAATT GCCCAAGGTG TATGAACGAA CCGGCACCCT GAAGGTGTTC TTCCTGCTCA GATTCTGTCT CGAGGGCTCC ATTTTCCTGG GTTTGAGCTT GCGCGTGCTG ACTTTCGCAT CGACCGACAT CCTGTTCAAG GTCGTCTCCG TAACGGCATG CGCCATGCTG CTGAGCGCCC TCATGCTTAC GTTCGCCAAC AACGAGGTCA GCAACGTCTG GGGCTTCATG CCGGTGCCGG TCATGGTGGG CGGACGCTTC AGCAAGGCCT GCCAGCAGGT CAAAGGGGAC TACGGGCTGA CCGCGCGGGA ATACGAGGTC ATGCAGCTGG TCATGCGCGG GCGCAACGGA ACGTTCATCC AGGACAAGCT CGTCATTTCG CAAAGCACGT TCCAGACGCA TATGCGCAAC CTCTACCGCA AGCTGGACAT CCATAGCAAC CAAGAGCTCA TCGACCTGCT TGAAGAGTAC ATTCAAAAGG TGGACGACCG GCAATAG
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Protein sequence | MAEVEAQKAF SEAYAKARSM DEAALSHPSM DKDPVTWTEV IRSFHFKRLK EDAGLVGALG FGCIQAWLFL SCFAPSRFMG SIWVGEYSAM RQLMTFACYL LTSCLFAEVI TARKPMVQAS VLTIAAALAS LSLSGSLFAG AGSEVIGALA NVKCILSGSA MGYCLALWAR HYAATGNHET LRIGEGLMTS VLVVAVCLLG SRFGIVSSVV LPLVTLGCLH WGLRLSRNAA KPPVQEKPAS KNDVPMPPLP WRLMLGLIAL GLGYGLCLGY SESTGSYPPS IVSVCLAVNA LVGGILVVYA VQTGSNFGYS DACAVVLPLA VFGQCWISTF QNELLPVAAA AMRAAFLLFD CLLWLQLPKV YERTGTLKVF FLLRFCLEGS IFLGLSLRVL TFASTDILFK VVSVTACAML LSALMLTFAN NEVSNVWGFM PVPVMVGGRF SKACQQVKGD YGLTAREYEV MQLVMRGRNG TFIQDKLVIS QSTFQTHMRN LYRKLDIHSN QELIDLLEEY IQKVDDRQ
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