| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2742 |
|---|
| Symbol | |
|---|
| ID | 8417068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 3179167 |
|---|
| End bp | 3180801 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645025718 |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003183079 |
|---|
| Protein GI | 257792473 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGGGA AGAGCTTCGT GCAAGCGGGC GATTGGGATG GACACGGTGC TTTCGGGCTC
CATCGCCTCT GCTGCGTGCG GAATCGGCTA TGGTACAATT CCGCCATGAA GCAAGGGGAG
GAAAACGGAA GTGGTGAGCG CGCCCGGGCG GTTGACCGGT ATCTTCATAC TGGTTCTTTC
GAGGCGTTCA GATCGACATT CCTATCCGGT TTGGTTCTTG CTTTTTTCGG CATAGGCTTC
TACCGGCTCT GGTACCAGTT CAACTTCTAC AACCTGCATT TTTCCGCCGA CGTGGGCATG
GTGACGGTGG GTGCGAACGT CGCTCGGGTG GTGGTGATCG CGCTGCTGGT TTTGCTAGTG
TACAAGGCCG GTTTCACGCG TGCGACGCGC GGTGTGTTCG TATGGTCCGG CTTCGTGCTT
ATGACGGTTT CCAGCTTGCT TTACTTGCTC GATCTCTTTT TCGACGCGAC CCGATTCGAG
GCGCTACGCG TCATCGTCGG AGGAATAGGT CTGGTCGGCG GCGAGATCAT CTGGATTTTC
TTTCTCGAAC GGCTTCGTCC TGGCGAAGTA TTCTTCTACG CTGCCGGCGG CTTGGCTCTT
TCATGCGCGC TCTCGCTCGT CATGGGGTAT TTGGATCCTG TCGTTTCGGG CATGATCAAC
CTGTTCATTC CCGCCCTGTC GGTGTTCGCG TACTGGCAGG CGATGACGCG CCTTGACGAG
CGCGCCAAAA CGACGCGGGC GGGTCGGGAA GACGGCATGG GGAAGGCTCC GGGGGTCGAT
GCGCTGTACG AATCGGATCC GTTTCGTACA GGAGCCGTGC ATGCGCTGAT CGCGTTCTTC
CTGTACGCGC TGCTGCTGGG CATGGCGCTT GGATACCCCG ATGGACGTCA TCGAGAATTG
TCGCAAACGG TTCGTTCGAT TCATCAGGTG CTCGTGGTGC TGCTGATCGC GTTCGTCGTG
TGGCTCGTGC TGGTGCGGGG ACGTTCGTTC AAGTTGTCCG GATACTGGCT GTTTCAGAAT
GCGCTCATGA TGGCCAGCAT ATGCTTTTTG ATGAGCGGAT CGAGCGGATC CGAAGAAGCC
AGCACGTTTC TTCTGACCAA TGCGGTGACG TGCTTCTATA TCCCCCTCGT GTTCTTCATT
TGTCTCATCG GCCGCCACGT CCACTATCAG ACGACGTTGG TATACGCGGT GGTTTACGGC
GGTTCGCTTC TGTGCATGGC CGTTGGACGC ATTATTGTGT ACGCGGTAGG CCCGACGCTC
GATCATAGTT TGTGGCTGCT CATCGTGATG GCGATCGTGG TGCTGGTCGA AGCGACGCTC
ATTATGAGGC CGCGTTTCAT GGGCGATTAC CCAATCGGCT TCGAGCTTGG GACTATGCGA
AACGAAGCGT CCGAAGGGGC CGCCGAGGTC GGGGTCGTCG ATCCTGTTGC GGCATTCGCA
GGGTTGTACG GCTTGAGCGA CGTCGAGAGG GATATCGTGT CGCTTATTTC CCAAGGTCGA
AGTCGATCCT TCATCGCTCA AACGCTTAAT TACTCGGAAA ACACCATCCG GAATTATACG
AGGACGGTGT ACCGTAAAGT CGGGGTGCAT TCCAAGCAAG AGCTGCTCGA CAAAGTTGCC
GACGCGCGAG AATAA
|
|---|
| Protein sequence | MGGKSFVQAG DWDGHGAFGL HRLCCVRNRL WYNSAMKQGE ENGSGERARA VDRYLHTGSF
EAFRSTFLSG LVLAFFGIGF YRLWYQFNFY NLHFSADVGM VTVGANVARV VVIALLVLLV
YKAGFTRATR GVFVWSGFVL MTVSSLLYLL DLFFDATRFE ALRVIVGGIG LVGGEIIWIF
FLERLRPGEV FFYAAGGLAL SCALSLVMGY LDPVVSGMIN LFIPALSVFA YWQAMTRLDE
RAKTTRAGRE DGMGKAPGVD ALYESDPFRT GAVHALIAFF LYALLLGMAL GYPDGRHREL
SQTVRSIHQV LVVLLIAFVV WLVLVRGRSF KLSGYWLFQN ALMMASICFL MSGSSGSEEA
STFLLTNAVT CFYIPLVFFI CLIGRHVHYQ TTLVYAVVYG GSLLCMAVGR IIVYAVGPTL
DHSLWLLIVM AIVVLVEATL IMRPRFMGDY PIGFELGTMR NEASEGAAEV GVVDPVAAFA
GLYGLSDVER DIVSLISQGR SRSFIAQTLN YSENTIRNYT RTVYRKVGVH SKQELLDKVA
DARE
|
|---|
| |