Gene Elen_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1291 
Symbol 
ID8415586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1548018 
End bp1548920 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content61% 
IMG OID645024257 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003181649 
Protein GI257791043 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.979242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTATC CGGTATTCCT GTACAACATG CTCCTTGCGG CGACGTACGT CGTTCTCGCG 
GTCGTGTTCT TCTGGCTGCA CCGTTCGCGG TCCAGCCGTC TGGCGTGGTG GCTCATGATC
CTGTTCGCCT GCTCGTTCGT GGACAACGGA ACCTATTTCA TGAAAGAAGT GTTCACGGCG
CTAGGCCATC CCGATCCTCT GTTCGCGACG TTCTACCAGG CTGCGGAAGC CCTGTTCATA
GCCTGCTACC CCTTCATCAT CCGCATGATC AGCGGTTGCT TTTACGATGA TATGCCGTCG
AAGCGATCGA TGGTCGTGCT CGGCGCGGCT TGCGCCGTCG CGACGGCGCT CGGCGTCGCC
GCGCCCGTCG TGCCTTACTC GGTGTTCGGC ACGGTGTACC CCCTTCTGTA CGCGTGGGTG
TTCCTGCGGC TGATTCCCAA GATGGACGGC GTTTGGCCGA AGGCGGTGGT CGTCTCGCTG
GTGGTGCTGC ACGTGATCGA CGCGACGTGC CGTGTGCTGG GGGTGGAGGC CGTCCTGTTC
TGGGAGAACC GCGACCTTCT GGTGGAAACG TGCTGGGCGA TCTACGTCGG ATGCGCCGTC
TATATCGCGT GGACGCTGCT GCACACGGTG GAGCAGCCGT ACCTGCCGAA CGTCGACATG
TCGTTCCGGC GTTTCCTCGA CGCTTACGGT CTGAGCGGCC GCGAGGGAGA GATCGTGAAG
CTGCTCATGG AGGGCGAGAC GAACCAGGGC ATCTGCAACA AGCTGTACAT CGCGGCGGGC
ACGGTGAAGG CGCACAACCA CAGCATTTAC AAGAAGCTGG GGATAGAGAA CCGCTCGCAG
GTTTTGCTCA AGTACACCGA TTATCTGGAG CGTAGCGCCC AGGAAGCGCG ATTGTTCTGC
TGA
 
Protein sequence
MTYPVFLYNM LLAATYVVLA VVFFWLHRSR SSRLAWWLMI LFACSFVDNG TYFMKEVFTA 
LGHPDPLFAT FYQAAEALFI ACYPFIIRMI SGCFYDDMPS KRSMVVLGAA CAVATALGVA
APVVPYSVFG TVYPLLYAWV FLRLIPKMDG VWPKAVVVSL VVLHVIDATC RVLGVEAVLF
WENRDLLVET CWAIYVGCAV YIAWTLLHTV EQPYLPNVDM SFRRFLDAYG LSGREGEIVK
LLMEGETNQG ICNKLYIAAG TVKAHNHSIY KKLGIENRSQ VLLKYTDYLE RSAQEARLFC