More than 300 homologs were found in PanDaTox collection
for query gene GWCH70_0367 on replicon NC_012793
Organism: Geobacillus sp. WCH70



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012793  GWCH70_0367  transcriptional regulator, LuxR family  100 
 
 
556 aa  1162    Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1243  transcriptional regulator, LuxR family  50.45 
 
 
550 aa  548  1e-155  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008346  Swol_0186  response regulator receiver protein  55.88 
 
 
213 aa  75.1  0.000000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000327076  n/a   
 
 
-
 
NC_007492  Pfl01_4706  ATP-dependent transcription regulator LuxR  51.61 
 
 
911 aa  73.2  0.00000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.157543 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  66 
 
 
213 aa  72.8  0.00000000001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  38.52 
 
 
221 aa  72.4  0.00000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_009439  Pmen_1136  regulatory protein, LuxR  58.18 
 
 
868 aa  72.8  0.00000000002  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.87643 
 
 
-
 
NC_011729  PCC7424_5070  two component transcriptional regulator, LuxR family  42.11 
 
 
210 aa  71.6  0.00000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.744929 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  56.9 
 
 
210 aa  71.6  0.00000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_3658  regulatory protein, LuxR  55.36 
 
 
914 aa  71.6  0.00000000004  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0794  regulatory protein, LuxR  32.82 
 
 
905 aa  71.2  0.00000000004  Pseudomonas putida F1  Bacteria  normal  normal  0.23816 
 
 
-
 
NC_002947  PP_0767  LuxR family transcriptional regulator  51.61 
 
 
905 aa  70.9  0.00000000006  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  38.89 
 
 
217 aa  70.5  0.00000000007  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  55.93 
 
 
216 aa  70.5  0.00000000007  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  52.46 
 
 
213 aa  70.1  0.00000000009  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  48.65 
 
 
208 aa  70.1  0.00000000009  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0808  ATP-dependent transcription regulator LuxR  53.57 
 
 
905 aa  69.7  0.0000000001  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4422  ATP-dependent transcription regulator LuxR  50.82 
 
 
905 aa  69.7  0.0000000001  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  58.73 
 
 
213 aa  69.3  0.0000000002  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  33.59 
 
 
211 aa  69.3  0.0000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_011729  PCC7424_1418  two component transcriptional regulator, LuxR family  46.15 
 
 
249 aa  69.3  0.0000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013510  Tcur_1998  transcriptional regulator, LuxR family  43.33 
 
 
956 aa  68.9  0.0000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0120259  n/a   
 
 
-
 
NC_004578  PSPTO_1151  transcriptional regulator, LuxR family  53.57 
 
 
910 aa  68.6  0.0000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  48.53 
 
 
222 aa  68.6  0.0000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_007005  Psyr_0993  regulatory protein, LuxR  54.72 
 
 
920 aa  67.8  0.0000000005  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.962183  normal 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  50.82 
 
 
220 aa  67.8  0.0000000005  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  43.59 
 
 
230 aa  67.8  0.0000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  57.69 
 
 
211 aa  67.4  0.0000000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20540  regulatory protein LuxR  47.14 
 
 
887 aa  67.4  0.0000000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  51.61 
 
 
209 aa  67.4  0.0000000007  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  40.28 
 
 
244 aa  67  0.0000000008  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_19850  putative transcriptional regulator  50.85 
 
 
827 aa  67  0.0000000008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.326832  normal 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  58 
 
 
217 aa  67  0.0000000008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  54.39 
 
 
218 aa  67  0.0000000008  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  33.33 
 
 
225 aa  67  0.0000000008  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_009656  PSPA7_1706  transcriptional regulator  50.85 
 
 
827 aa  67  0.0000000008  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_2623  two component transcriptional regulator, LuxR family  40 
 
 
210 aa  67  0.0000000009  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3480  two component transcriptional regulator, LuxR family  40 
 
 
210 aa  67  0.0000000009  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.147525 
 
 
-
 
NC_007413  Ava_0661  two component LuxR family transcriptional regulator  41.56 
 
 
239 aa  66.2  0.000000001  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.0000223942  normal  0.0624831 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  56.92 
 
 
222 aa  66.2  0.000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5428  two component transcriptional regulator, LuxR family  56.36 
 
 
201 aa  66.2  0.000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.358603 
 
 
-
 
NC_007954  Sden_3055  response regulator receiver  33.08 
 
 
219 aa  66.6  0.000000001  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  51.67 
 
 
210 aa  65.9  0.000000002  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  51.67 
 
 
210 aa  65.9  0.000000002  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  51.67 
 
 
210 aa  65.9  0.000000002  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  51.67 
 
 
210 aa  65.9  0.000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_005957  BT9727_1322  response regulator  51.67 
 
 
210 aa  65.9  0.000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  51.67 
 
 
210 aa  65.9  0.000000002  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  49.18 
 
 
226 aa  65.9  0.000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_007413  Ava_4096  two component LuxR family transcriptional regulator  54.9 
 
 
237 aa  66.2  0.000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.811447  normal  0.807841 
 
 
-
 
NC_009767  Rcas_4222  ATP-dependent transcription regulator LuxR  55.77 
 
 
309 aa  65.9  0.000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.157864 
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  51.67 
 
 
210 aa  65.9  0.000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_013131  Caci_8304  transcriptional regulator, LuxR family  47.46 
 
 
1084 aa  65.9  0.000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  51.67 
 
 
210 aa  65.9  0.000000002  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  51.67 
 
 
210 aa  65.9  0.000000002  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_010718  Nther_0747  two component transcriptional regulator, LuxR family  40 
 
 
232 aa  65.1  0.000000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.643618  normal  0.38139 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  49.15 
 
 
227 aa  65.1  0.000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  50.88 
 
 
215 aa  65.5  0.000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  52.38 
 
 
216 aa  65.1  0.000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  51.72 
 
 
211 aa  65.5  0.000000003  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_009972  Haur_1995  ATP-dependent transcription regulator LuxR  43.84 
 
 
1019 aa  65.1  0.000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.686742  n/a   
 
 
-
 
NC_008726  Mvan_5522  two component LuxR family transcriptional regulator  46.67 
 
 
219 aa  65.1  0.000000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  54.9 
 
 
214 aa  65.1  0.000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  54.72 
 
 
214 aa  65.1  0.000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.785726 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  35.9 
 
 
236 aa  65.1  0.000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.67 
 
 
221 aa  65.1  0.000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  50.79 
 
 
220 aa  64.7  0.000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_13150  putative transcriptional regulator  53.57 
 
 
906 aa  64.7  0.000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.697366  normal 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  53.97 
 
 
218 aa  64.7  0.000000004  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  49.12 
 
 
226 aa  64.7  0.000000004  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  37.35 
 
 
225 aa  64.7  0.000000004  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  60 
 
 
216 aa  64.7  0.000000004  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_009656  PSPA7_1186  transcriptional regulator  53.57 
 
 
906 aa  65.1  0.000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  51.61 
 
 
234 aa  64.3  0.000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  47.37 
 
 
224 aa  64.7  0.000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  54.39 
 
 
220 aa  64.3  0.000000005  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_013216  Dtox_3277  transcriptional regulator, LuxR family  52.31 
 
 
224 aa  64.3  0.000000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  48.39 
 
 
242 aa  64.3  0.000000006  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  50 
 
 
210 aa  64.3  0.000000006  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.33 
 
 
215 aa  64.3  0.000000006  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  50 
 
 
210 aa  63.9  0.000000006  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_009767  Rcas_3763  two component LuxR family transcriptional regulator  45.21 
 
 
221 aa  63.9  0.000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0403461 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  50.88 
 
 
222 aa  63.9  0.000000007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  49.09 
 
 
212 aa  63.9  0.000000007  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1659  two component transcriptional regulator, LuxR family  40 
 
 
207 aa  63.9  0.000000007  Jonesia denitrificans DSM 20603  Bacteria  normal  0.319135  normal  0.0403017 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  55.56 
 
 
225 aa  63.9  0.000000007  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  36.7 
 
 
217 aa  63.9  0.000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2575  ATP-dependent transcriptional regulator, MalT-like, LuxR family  49.21 
 
 
917 aa  63.9  0.000000008  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.75 
 
 
226 aa  63.5  0.000000008  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  47.37 
 
 
221 aa  63.5  0.000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  57.69 
 
 
227 aa  63.5  0.000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  33.1 
 
 
219 aa  63.2  0.00000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  46.77 
 
 
232 aa  63.2  0.00000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  32.89 
 
 
219 aa  63.2  0.00000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1517  transcriptional regulator, LuxR family protein  44.87 
 
 
210 aa  63.5  0.00000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.776537  n/a   
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  51.67 
 
 
214 aa  63.2  0.00000001  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_013093  Amir_1549  two component transcriptional regulator, LuxR family  36.56 
 
 
238 aa  63.2  0.00000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.196807  n/a   
 
 
-
 
NC_013204  Elen_2193  transcriptional regulator, LuxR family  50.88 
 
 
258 aa  63.2  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  49.15 
 
 
242 aa  63.2  0.00000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  48.33 
 
 
224 aa  62.8  0.00000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>