Gene Elen_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0157 
Symbol 
ID8414441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp219141 
End bp220106 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content65% 
IMG OID645023137 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003180540 
Protein GI257789934 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGTTCG TGCTCTTCCA TTTCACCCTG ATCGTGCTGC TGGCTTCCGT CCTCACCTCG 
GCTGCGTGCC TGTCGGCGTA CCTCGTGTCG CGCAAGCGCG TGCTGCTGTT CGCGTTCCTC
GCGTTTCTGT TCTACTTCTT CGACGTGGCC TGGGTGTTGC AGGACGAGCT CATGTATCCG
GGGCTCGATG CGCAGATGAC CAGCGCGTAC CTGATGGTGC GCTCGTACGC GTCCATCCTG
GCGGGCGCTG GGTTCCTCGT GTCGTTCTGG CTGGTGGTAT GCACGGTGCT CGGCGAGAAG
AGCCGCGCGC TCATGGCGGT GCCCGGCGTG GTGTTCGTGG TGGCAAGCGC GGTGGTGCTC
ATCGTGTTTC CCGAGGGGAA CGTGCAGCGC TTCACGTTCT ACACCCTGCG CGCGCTGCTG
CTGTTCTGGA TGCTGGGATT CGCCGCGTAT CGCTACCGCA CGACGGACGA CAGCGTGGAG
CGCGGGCGAC TGCGCCGCCA CCTGCGCCTG TACGTGGCGC TGTGGGTGCT CGGCGTGTTG
GTGGTGGCCG AGGACGTGCT CTTCTTCCTC GTGGTGGATC CGGCGACGCT TGGCATCGGG
CCGTGGGCGT TCACGTCCGA GCGCAACTAC GCCGAGAACG CGTTGATGCT CGTCTGCATG
TTCGTGGCGT GCCGCGACGC GTTCCGCACG CTCGCGTTGC GCTTCGAGCA TCCGCCGGCG
CCGGGCGGCG AGCGCCGCGA GGCGGTGCTG AACGACACGC TCATGCGGTA CGGCAAGCAG
CATCAGCTGT CCGAGCGCGA GCGGGAGGTG CTGTACCTCG TCCTGCAGGG CAACGACAAT
CAGAACATCG CCTCGTCGTT GCAGCTGTCG CCCAGCACCG TGAAGGTGCA CGTGCACAAC
ATCCTGCAAA AATCCGGTCA GGCGAACCGT CAGGAGCTTA TCCGGGACTT CTGGAGGATG
TCCTAG
 
Protein sequence
MGFVLFHFTL IVLLASVLTS AACLSAYLVS RKRVLLFAFL AFLFYFFDVA WVLQDELMYP 
GLDAQMTSAY LMVRSYASIL AGAGFLVSFW LVVCTVLGEK SRALMAVPGV VFVVASAVVL
IVFPEGNVQR FTFYTLRALL LFWMLGFAAY RYRTTDDSVE RGRLRRHLRL YVALWVLGVL
VVAEDVLFFL VVDPATLGIG PWAFTSERNY AENALMLVCM FVACRDAFRT LALRFEHPPA
PGGERREAVL NDTLMRYGKQ HQLSEREREV LYLVLQGNDN QNIASSLQLS PSTVKVHVHN
ILQKSGQANR QELIRDFWRM S