More than 300 homologs were found in PanDaTox collection
for query gene RPB_3065 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007778  RPB_3065  two component LuxR family transcriptional regulator  100 
 
 		 217 aa  431  1e-120  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  41.71 
 
 		 211 aa  134  9.999999999999999e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.0337978 
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  39.61 
 
 		 209 aa  134  1.9999999999999998e-30  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal  1 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  38.43 
 
 		 232 aa  132  3e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_008346  Swol_0186  response regulator receiver protein  38.86 
 
 		 213 aa  132  3.9999999999999996e-30  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000327076  n/a   
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  41.43 
 
 		 213 aa  131  6.999999999999999e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.624898 
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  37.9 
 
 		 226 aa  130  1.0000000000000001e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  38.36 
 
 		 229 aa  129  2.0000000000000002e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  37.79 
 
 		 225 aa  130  2.0000000000000002e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  38.46 
 
 		 226 aa  129  3e-29  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal  1 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  37.96 
 
 		 215 aa  129  5.0000000000000004e-29  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  37.32 
 
 		 235 aa  128  7.000000000000001e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  38.53 
 
 		 218 aa  128  7.000000000000001e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  41.23 
 
 		 217 aa  128  7.000000000000001e-29  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  39.32 
 
 		 216 aa  128  8.000000000000001e-29  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  37.56 
 
 		 241 aa  127  1.0000000000000001e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  42 
 
 		 228 aa  127  1.0000000000000001e-28  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_1708  two component LuxR family transcriptional regulator  39.42 
 
 		 221 aa  127  1.0000000000000001e-28  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.685529 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  40.76 
 
 		 212 aa  127  1.0000000000000001e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  40.78 
 
 		 211 aa  127  1.0000000000000001e-28  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  34.63 
 
 		 212 aa  126  2.0000000000000002e-28  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  38.76 
 
 		 218 aa  127  2.0000000000000002e-28  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  39.91 
 
 		 217 aa  126  3e-28  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  34.27 
 
 		 214 aa  125  4.0000000000000003e-28  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  38.12 
 
 		 215 aa  125  4.0000000000000003e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_009439  Pmen_4183  two component LuxR family transcriptional regulator  35.48 
 
 		 220 aa  125  4.0000000000000003e-28  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006274  BCZK1321  response regulator  36.59 
 
 		 210 aa  125  6e-28  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  40.8 
 
 		 207 aa  124  8.000000000000001e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  38.03 
 
 		 226 aa  124  8.000000000000001e-28  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  39.81 
 
 		 225 aa  124  9e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  35.51 
 
 		 248 aa  124  9e-28  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  38.68 
 
 		 226 aa  124  1e-27  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.554715 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  39.62 
 
 		 223 aa  124  1e-27  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_007005  Psyr_1940  LuxR response regulator receiver  36.62 
 
 		 222 aa  124  1e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.95717  normal  1 
 
 
-
 
NC_009972  Haur_4485  two component LuxR family transcriptional regulator  36.95 
 
 		 213 aa  124  1e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.310872  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  39.07 
 
 		 215 aa  124  1e-27  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  35.55 
 
 		 228 aa  124  1e-27  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  37.62 
 
 		 230 aa  124  1e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  38.5 
 
 		 230 aa  124  1e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  36.2 
 
 		 225 aa  123  2e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  38.6 
 
 		 215 aa  123  2e-27  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_1400  two component signal transduction response regulator  33.81 
 
 		 214 aa  123  2e-27  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  36.41 
 
 		 213 aa  123  2e-27  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  35.71 
 
 		 218 aa  123  2e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  36.7 
 
 		 224 aa  123  2e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  36.1 
 
 		 210 aa  123  2e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  37.26 
 
 		 216 aa  123  2e-27  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  36.1 
 
 		 210 aa  122  3e-27  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  35.65 
 
 		 218 aa  122  3e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  37.27 
 
 		 226 aa  122  4e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  36.1 
 
 		 210 aa  122  4e-27  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  36.1 
 
 		 210 aa  122  4e-27  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  36.1 
 
 		 210 aa  122  4e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  36.1 
 
 		 210 aa  122  4e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  36.1 
 
 		 210 aa  122  4e-27  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  34.93 
 
 		 210 aa  122  4e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  36.1 
 
 		 210 aa  122  4e-27  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  34.58 
 
 		 216 aa  122  5e-27  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  38.14 
 
 		 215 aa  122  5e-27  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  35.21 
 
 		 214 aa  121  6e-27  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_008009  Acid345_3748  two component LuxR family transcriptional regulator  36.23 
 
 		 211 aa  122  6e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.107866  normal  1 
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  37.32 
 
 		 227 aa  121  6e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal  1 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  32.58 
 
 		 228 aa  122  6e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  36.1 
 
 		 210 aa  122  6e-27  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  38.14 
 
 		 215 aa  121  7e-27  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_2130  DNA-binding response regulator, LuxR family  35.91 
 
 		 222 aa  121  7e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_3676  two component transcriptional regulator, LuxR family  37.02 
 
 		 214 aa  121  7e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0625047  normal  0.0780809 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  37.85 
 
 		 215 aa  121  7e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  38.28 
 
 		 226 aa  121  8e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  38.6 
 
 		 215 aa  121  8e-27  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  38.6 
 
 		 215 aa  121  8e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  38.6 
 
 		 215 aa  121  8e-27  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  38.6 
 
 		 215 aa  121  8e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  38.6 
 
 		 215 aa  121  8e-27  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  38.86 
 
 		 219 aa  121  8e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  36.92 
 
 		 235 aa  121  8e-27  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal  1 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  35.45 
 
 		 218 aa  121  8e-27  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  36.71 
 
 		 217 aa  121  9e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  39.02 
 
 		 220 aa  120  9.999999999999999e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal  1 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  38.57 
 
 		 211 aa  121  9.999999999999999e-27  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  34.72 
 
 		 218 aa  120  9.999999999999999e-27  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  34.93 
 
 		 216 aa  121  9.999999999999999e-27  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  33.96 
 
 		 222 aa  120  9.999999999999999e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  35.96 
 
 		 209 aa  121  9.999999999999999e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  40 
 
 		 226 aa  120  9.999999999999999e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  34.72 
 
 		 218 aa  120  9.999999999999999e-27  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  38.46 
 
 		 234 aa  120  9.999999999999999e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal  1 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  37.81 
 
 		 227 aa  121  9.999999999999999e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  34.6 
 
 		 241 aa  120  9.999999999999999e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_011772  BCG9842_B2026  Two-component protein Kinase  35.48 
 
 		 595 aa  120  9.999999999999999e-27  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  37.04 
 
 		 209 aa  120  9.999999999999999e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  38.94 
 
 		 207 aa  120  9.999999999999999e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal  1 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  36.28 
 
 		 222 aa  120  9.999999999999999e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  37.21 
 
 		 225 aa  120  1.9999999999999998e-26  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  34.43 
 
 		 213 aa  120  1.9999999999999998e-26  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  38.57 
 
 		 222 aa  120  1.9999999999999998e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_011725  BCB4264_A3228  Two-component protein Kinase  35.02 
 
 		 595 aa  120  1.9999999999999998e-26  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_2450  two component LuxR family transcriptional regulator  33.78 
 
 		 214 aa  120  1.9999999999999998e-26  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00539256  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  35.21 
 
 		 216 aa  120  1.9999999999999998e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  34.45 
 
 		 216 aa  119  1.9999999999999998e-26  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
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