More than 300 homologs were found in PanDaTox collection
for query gene Plav_1613 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_4575  isovaleryl-CoA dehydrogenase  71.7 
 
 
560 aa  733    Methylobacterium sp. 4-46  Bacteria  normal  0.138907  hitchhiker  0.00955586 
 
 
-
 
NC_010172  Mext_2228  acyl-CoA dehydrogenase domain-containing protein  69.57 
 
 
562 aa  745    Methylobacterium extorquens PA1  Bacteria  normal  0.489531  normal  0.489903 
 
 
-
 
NC_009049  Rsph17029_0312  isovaleryl-CoA dehydrogenase  71.3 
 
 
555 aa  775    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4511  acyl-CoA dehydrogenase domain protein  71.24 
 
 
560 aa  751    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.547594  n/a   
 
 
-
 
NC_010505  Mrad2831_4351  acyl-CoA dehydrogenase domain-containing protein  68.5 
 
 
560 aa  752    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.05445  normal 
 
 
-
 
NC_007493  RSP_1679  acyl-CoA dehydrogenase  71.3 
 
 
548 aa  775    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0534807  n/a   
 
 
-
 
NC_009719  Plav_1613  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
568 aa  1155    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.10785  normal 
 
 
-
 
NC_007643  Rru_A3064  isovaleryl-CoA dehydrogenase  65.83 
 
 
563 aa  731    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.326905  n/a   
 
 
-
 
NC_007802  Jann_0530  Acyl-CoA dehydrogenase  68.01 
 
 
560 aa  760    Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2504  acyl-CoA dehydrogenase domain protein  69.57 
 
 
562 aa  747    Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0181987  normal 
 
 
-
 
NC_009428  Rsph17025_2567  acyl-CoA dehydrogenase domain-containing protein  71.48 
 
 
555 aa  780    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.349993 
 
 
-
 
NC_010338  Caul_1059  acyl-CoA dehydrogenase domain-containing protein  63.59 
 
 
569 aa  666    Caulobacter sp. K31  Bacteria  normal  normal  0.773265 
 
 
-
 
NC_010725  Mpop_2186  acyl-CoA dehydrogenase domain protein  69 
 
 
562 aa  741    Methylobacterium populi BJ001  Bacteria  normal  0.0552217  normal 
 
 
-
 
NC_008044  TM1040_2444  isovaleryl-CoA dehydrogenase  67.34 
 
 
567 aa  745    Ruegeria sp. TM1040  Bacteria  normal  0.590306  normal  0.477736 
 
 
-
 
NC_009952  Dshi_0204  acyl-CoA dehydrogenase  66.67 
 
 
564 aa  743    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0731517  normal  0.952971 
 
 
-
 
NC_009720  Xaut_0310  acyl-CoA dehydrogenase domain-containing protein  69.56 
 
 
563 aa  788    Xanthobacter autotrophicus Py2  Bacteria  normal  0.0589554  normal  0.08283 
 
 
-
 
NC_008687  Pden_2840  Acyl-CoA dehydrogenase  67.74 
 
 
551 aa  712    Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3795  acyl-CoA dehydrogenase domain-containing protein  62.38 
 
 
528 aa  594  1e-168  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_2897  acyl-CoA dehydrogenase-like protein  60.31 
 
 
527 aa  580  1e-164  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2430  acyl-CoA dehydrogenase-like  45.31 
 
 
385 aa  315  9.999999999999999e-85  Frankia sp. CcI3  Bacteria  decreased coverage  0.000440313  normal  0.478447 
 
 
-
 
NC_013739  Cwoe_4224  acyl-CoA dehydrogenase domain protein  42.08 
 
 
400 aa  305  2.0000000000000002e-81  Conexibacter woesei DSM 14684  Bacteria  normal  0.0700017  normal  0.0824066 
 
 
-
 
NC_013510  Tcur_2510  acyl-CoA dehydrogenase domain protein  44.22 
 
 
397 aa  298  2e-79  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0195405  n/a   
 
 
-
 
NC_009077  Mjls_4228  isovaleryl-CoA dehydrogenase  42.63 
 
 
385 aa  297  4e-79  Mycobacterium sp. JLS  Bacteria  normal  0.950044  normal  0.66405 
 
 
-
 
NC_008786  Veis_1583  acyl-CoA dehydrogenase domain-containing protein  42.38 
 
 
412 aa  289  9e-77  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.266068  hitchhiker  0.00354782 
 
 
-
 
NC_013510  Tcur_4635  acyl-CoA dehydrogenase domain protein  41.78 
 
 
386 aa  288  1e-76  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4054  acyl-CoA dehydrogenase domain-containing protein  41.94 
 
 
384 aa  288  1e-76  Frankia sp. EAN1pec  Bacteria  normal  normal  0.168546 
 
 
-
 
NC_007953  Bxe_C0833  putative acyl-CoA dehydrogenase  42.56 
 
 
385 aa  286  5.999999999999999e-76  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.00815342 
 
 
-
 
NC_013131  Caci_7768  acyl-CoA dehydrogenase domain protein  41.24 
 
 
397 aa  285  1.0000000000000001e-75  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0446  butyryl-CoA dehydrogenase  41.01 
 
 
385 aa  283  9e-75  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.981915  normal 
 
 
-
 
NC_014165  Tbis_2091  acyl-CoA dehydrogenase domain-containing protein  42.78 
 
 
386 aa  281  2e-74  Thermobispora bispora DSM 43833  Bacteria  normal  0.0244674  normal  0.176746 
 
 
-
 
NC_013595  Sros_6335  acyl-CoA dehydrogenase domain protein  40.51 
 
 
386 aa  281  3e-74  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0389315  normal  0.725662 
 
 
-
 
NC_007974  Rmet_4427  Butyryl-CoA dehydrogenase  41.39 
 
 
388 aa  280  4e-74  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.0000160956  normal  0.322206 
 
 
-
 
NC_008705  Mkms_0191  butyryl-CoA dehydrogenase  40.92 
 
 
385 aa  280  5e-74  Mycobacterium sp. KMS  Bacteria  normal  0.297032  normal 
 
 
-
 
NC_008146  Mmcs_0182  butyryl-CoA dehydrogenase  40.92 
 
 
385 aa  280  5e-74  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2093  acyl-CoA dehydrogenase domain-containing protein  40.21 
 
 
398 aa  280  7e-74  Thermobispora bispora DSM 43833  Bacteria  normal  0.0300334  normal  0.0497691 
 
 
-
 
NC_013441  Gbro_4180  acyl-CoA dehydrogenase domain protein  38.83 
 
 
383 aa  278  2e-73  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1139  acyl-CoA dehydrogenase domain protein  39.95 
 
 
399 aa  278  2e-73  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0171  butyryl-CoA dehydrogenase  40.66 
 
 
385 aa  277  3e-73  Mycobacterium sp. JLS  Bacteria  normal  normal  0.260341 
 
 
-
 
NC_007348  Reut_B3825  butyryl-CoA dehydrogenase  41.13 
 
 
400 aa  276  6e-73  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2167  butyryl-CoA dehydrogenase  39.9 
 
 
399 aa  276  6e-73  Frankia sp. CcI3  Bacteria  normal  0.592182  normal  0.710802 
 
 
-
 
NC_007908  Rfer_4169  butyryl-CoA dehydrogenase  40.85 
 
 
383 aa  276  6e-73  Rhodoferax ferrireducens T118  Bacteria  normal  0.0614852  n/a   
 
 
-
 
NC_007908  Rfer_4181  butyryl-CoA dehydrogenase  40.85 
 
 
383 aa  276  6e-73  Rhodoferax ferrireducens T118  Bacteria  normal  0.0181503  n/a   
 
 
-
 
NC_013922  Nmag_3108  acyl-CoA dehydrogenase domain protein  40.36 
 
 
383 aa  276  1.0000000000000001e-72  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0615  acyl-CoA dehydrogenase domain protein  40.11 
 
 
387 aa  275  2.0000000000000002e-72  Burkholderia phytofirmans PsJN  Bacteria  normal  0.210833  normal  0.0397055 
 
 
-
 
NC_013202  Hmuk_2068  acyl-CoA dehydrogenase domain protein  39.8 
 
 
385 aa  274  3e-72  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_007951  Bxe_A4085  putative acyl-CoA dehydrogenase  39.84 
 
 
387 aa  274  3e-72  Burkholderia xenovorans LB400  Bacteria  normal  0.14575  normal 
 
 
-
 
NC_007348  Reut_B4150  butyryl-CoA dehydrogenase  40.62 
 
 
388 aa  273  5.000000000000001e-72  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_0919  acyl-CoA dehydrogenase domain protein  39.9 
 
 
383 aa  273  7e-72  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009077  Mjls_1740  acyl-CoA dehydrogenase domain-containing protein  39.69 
 
 
397 aa  271  2.9999999999999997e-71  Mycobacterium sp. JLS  Bacteria  normal  0.0177648  normal 
 
 
-
 
NC_008705  Mkms_1806  acyl-CoA dehydrogenase domain-containing protein  39.69 
 
 
397 aa  271  2.9999999999999997e-71  Mycobacterium sp. KMS  Bacteria  normal  normal  0.580831 
 
 
-
 
NC_008146  Mmcs_1759  acyl-CoA dehydrogenase-like protein  39.69 
 
 
397 aa  271  2.9999999999999997e-71  Mycobacterium sp. MCS  Bacteria  normal  0.218239  n/a   
 
 
-
 
NC_009338  Mflv_4367  butyryl-CoA dehydrogenase  39.33 
 
 
397 aa  270  5e-71  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  40.36 
 
 
379 aa  265  1e-69  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1977  butyryl-CoA dehydrogenase  39.07 
 
 
397 aa  266  1e-69  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0673  acyl-CoA dehydrogenase domain-containing protein  40.2 
 
 
400 aa  264  3e-69  Salinispora arenicola CNS-205  Bacteria  normal  0.514226  normal 
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  40.21 
 
 
384 aa  263  8.999999999999999e-69  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_008726  Mvan_0221  butyryl-CoA dehydrogenase  40 
 
 
385 aa  263  8.999999999999999e-69  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0556 
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  40.62 
 
 
385 aa  261  2e-68  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0727  acyl-CoA dehydrogenase domain-containing protein  39.74 
 
 
398 aa  261  3e-68  Salinispora tropica CNB-440  Bacteria  normal  normal  0.230975 
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  40.62 
 
 
385 aa  261  3e-68  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1523  acyl-CoA dehydrogenase domain protein  39.47 
 
 
397 aa  261  3e-68  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0413288  n/a   
 
 
-
 
NC_008699  Noca_1456  acyl-CoA dehydrogenase domain-containing protein  37.37 
 
 
398 aa  259  9e-68  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  38.96 
 
 
384 aa  258  1e-67  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_008699  Noca_4073  acyl-CoA dehydrogenase domain-containing protein  38.14 
 
 
386 aa  257  4e-67  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_2901  acyl-CoA dehydrogenase domain protein  39.02 
 
 
379 aa  256  6e-67  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  40 
 
 
383 aa  256  7e-67  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  39.43 
 
 
384 aa  254  2.0000000000000002e-66  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  39.16 
 
 
384 aa  254  2.0000000000000002e-66  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  39.48 
 
 
385 aa  255  2.0000000000000002e-66  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_009565  TBFG_10217  acyl-CoA dehydrogenase fadE3  40.79 
 
 
373 aa  254  3e-66  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4031  acyl-CoA dehydrogenase domain-containing protein  37.82 
 
 
399 aa  254  3e-66  Frankia sp. EAN1pec  Bacteria  normal  0.328111  normal  0.707323 
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  36.79 
 
 
384 aa  253  5.000000000000001e-66  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  36.79 
 
 
384 aa  253  5.000000000000001e-66  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  40.21 
 
 
382 aa  252  1e-65  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_009921  Franean1_4533  acyl-CoA dehydrogenase domain-containing protein  37.56 
 
 
398 aa  252  2e-65  Frankia sp. EAN1pec  Bacteria  normal  0.0920452  normal 
 
 
-
 
NC_014212  Mesil_0298  acyl-CoA dehydrogenase domain protein  39.41 
 
 
381 aa  251  4e-65  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  40.26 
 
 
379 aa  250  4e-65  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_012029  Hlac_1318  acyl-CoA dehydrogenase domain protein  37.6 
 
 
384 aa  250  6e-65  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.0793911 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  36.2 
 
 
377 aa  248  1e-64  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  38.02 
 
 
383 aa  248  2e-64  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  38.76 
 
 
388 aa  248  2e-64  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  39.37 
 
 
376 aa  247  4e-64  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  40.62 
 
 
379 aa  246  6e-64  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  39.63 
 
 
379 aa  246  6.999999999999999e-64  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  39.68 
 
 
380 aa  246  9e-64  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  38.66 
 
 
380 aa  246  9.999999999999999e-64  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_3451  acyl-CoA dehydrogenase domain protein  40.99 
 
 
377 aa  245  9.999999999999999e-64  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  40.36 
 
 
380 aa  245  9.999999999999999e-64  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  38.96 
 
 
379 aa  245  1.9999999999999999e-63  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_013744  Htur_4420  acyl-CoA dehydrogenase domain protein  35.14 
 
 
383 aa  243  5e-63  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.135113  n/a   
 
 
-
 
NC_013525  Tter_0364  acyl-CoA dehydrogenase domain protein  36.53 
 
 
386 aa  243  7.999999999999999e-63  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014165  Tbis_1804  butyryl-CoA dehydrogenase  39.49 
 
 
386 aa  243  9e-63  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0847  acyl-CoA dehydrogenase domain-containing protein  36.83 
 
 
386 aa  243  9e-63  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  36.62 
 
 
381 aa  241  2e-62  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  36.98 
 
 
378 aa  241  2.9999999999999997e-62  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_010501  PputW619_2885  acyl-CoA dehydrogenase domain-containing protein  37.82 
 
 
383 aa  241  2.9999999999999997e-62  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_06620  butyryl-CoA dehydrogenase  38.46 
 
 
380 aa  240  4e-62  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  37.6 
 
 
376 aa  240  5e-62  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1770  acyl-CoA dehydrogenase domain protein  40.36 
 
 
512 aa  240  5e-62  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  37.6 
 
 
376 aa  240  5e-62  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
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