Gene Caci_7768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7768 
Symbol 
ID8339144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9007198 
End bp9008391 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content68% 
IMG OID644960852 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003118433 
Protein GI256396869 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCGCC TCGCGCAGAC CGACGGCCTG ACCGACATCC AGGAGGAGAT CCTGGCGACG 
GTCCGCACCT TCGTGGACAA GGAGATCATC CCGGTCGCCA ACGACCTGGA GCACGCCGAC
GAGTACCCGA CGCAGATCGT CGAGGGCATG AAGGAGATGG GCCTGTTCGG GCTCATGATC
CCCGAGGAGT ACGGCGGCCT CGGCGAGTCG CTGCTCACCT ACGCGCTGGT GGTCGAGGAG
ATCGCGCGCG GCTGGATGTC GGTGTCGGGG ATTCTGAACA CCCACTTCAT CGTGGCGTAC
ATGATCAAGC AGCACGGCAC GGACGAGCAG AAGCAGCACT TCCTGCCGCG CATGGCCGAG
GGCGAGGTCC GCGCCGCGTT CTCGATGTCG GAGCCGGCGC TCGGGTCGGA CGTCGCGGCG
ATCACGACCA AGGGCGTCCC CGACGGCGAT GATTACGTGA TCAACGGCCA GAAGATGTGG
CTGACCAACG GTGGTTCCTC CACGCTGGTC GCCCTGCTGG CCCGCACCGA CCTCGGCGAG
GCGGCGGCGC ACAAGAACCT CACCACCTTC CTGGTGGAGA AGCCCGCCGG CTTCGGCGAG
GTGGCGCCGG GCCTGACCGT CCCGGGCAAG ATCGCCAAGA TGGGCTACAA GGGCGTCGAC
ACCACCGAGC TGGTGCTGTC CGACTACCGC ATCCCGGCGA ACCGGATCCT CGGCGGCGCC
CCGGGCAAGG GCTTCGCGCA CATGATGGAC GGCGTCGAGG TCGGCCGGGT CAACGTCGCC
GCCCGCGCCT GCGGCATCGC GGTCCGCGCC TTCGAGCTCG GCGCCGCCTA CGCCCAGCAG
CGCACCACCT TCGGCAAGCC GATCGCGCAG CACCAGGCCA TCCAGTTCAA GCTGGCCGAG
ATGGGCGTCA AGGTCGAGGC GGCGCACGCG ATGATGGTGC GCGCCGCGAA GGTCAAGGAC
GCCGGCCGGC GCAACGACCT GGAAGCCGGG ATGGCCAAGT ACCTGGCCGC CGAGTACTGC
AAGGAGGTCG TCGAGGACTC CTTCCGCATC CACGGCGGCT ACGGGTACTC CAAGGAGTAC
GAGATCGAGC GCCTGTACCG CGAGGCGCCG ATGTTGCTCA TCGGCGAGGG GACCGCCGAG
ATCCAGAAGA TGATCATCGG CCGGCGGCTG CTCGAGGACT ACAAGGCGAA GTAG
 
Protein sequence
MGRLAQTDGL TDIQEEILAT VRTFVDKEII PVANDLEHAD EYPTQIVEGM KEMGLFGLMI 
PEEYGGLGES LLTYALVVEE IARGWMSVSG ILNTHFIVAY MIKQHGTDEQ KQHFLPRMAE
GEVRAAFSMS EPALGSDVAA ITTKGVPDGD DYVINGQKMW LTNGGSSTLV ALLARTDLGE
AAAHKNLTTF LVEKPAGFGE VAPGLTVPGK IAKMGYKGVD TTELVLSDYR IPANRILGGA
PGKGFAHMMD GVEVGRVNVA ARACGIAVRA FELGAAYAQQ RTTFGKPIAQ HQAIQFKLAE
MGVKVEAAHA MMVRAAKVKD AGRRNDLEAG MAKYLAAEYC KEVVEDSFRI HGGYGYSKEY
EIERLYREAP MLLIGEGTAE IQKMIIGRRL LEDYKAK