| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1843 |
|---|
| Symbol | |
|---|
| ID | 7979136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 1909511 |
|---|
| End bp | 1910653 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644798678 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_002949848 |
|---|
| Protein GI | 239827224 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTG AACTAACAAA AGAACAACAA ATGATTAAAG AAATGGTTCG TGAGTTTGCG
GAGAAGGAAA TTGCACCAAA CGCGGCGAAA TGGGATAAAG AAGCGTATTT CCCTGTTGAA
GTTTTTAAGA AGATGGGCGA GTTAGGACTT TTAGGAATTC CGTTTCCGGA AGAATATGGC
GGCGCCGGCG GAGATACGAT TTCATATGCG ATAGCCGTAG AAGAAATCGG CCGCGCATGC
GGCGGGACTG GATTAAGTTA TGCTGCTGCG GTTTCCCTAG GAGCAAGTCC GATTTATTAC
TTCGGCACGG AAGAACAAAA ACAAAAATGG CTTGTACCGA TGGCAAAAGG AGAAACGTTG
GGCGCATTTG GGCTAACTGA ACCAAATGCT GGGTCTGATG CGGGAGGAAC GCGGACGACA
GCGGTATTGG ATGGCGATGA GTATGTCATC AATGGAGAAA AATGCTGGAT CACAAATGCA
GAATACGCAC GACAAGTCAT TGTTACCGCC GTGACAGGAA AAGACGAACG GGGCAAAAAC
ATCATTTCCG CAATTATCGT TCCAACGGAC ACTCCAGGAT TTACGATCCG TTCAAACTAT
GACAAAATGG GCGTCCGCGC CTCGAATACG TGCGAATTAG TGTTTGAAAA CGTACGTGTG
CCAAAAGAAA ATGTTCTCGG AGATCCGAAA AAAGGCTTTA AGCAATTTTT ATATACGCTG
GATGGCGGAC GCATTTCCAT TGCTGCGCTG GCGGTTGGCA TTGCCCAAGC GGCATTTGAG
AAAGCGCTTC AATATGCGAA GGAGCGTGTC CAATTTGGTC AGACTATTTC AAAATTTCAA
GCAATACAAT TCAAGCTTGC CGATATGGCG ATGGAAATTG AGCTGGCGCG CAATATGGTG
TATAAGGCAG CTTGGTTAAA AGACCAAGGG AAACCGTTTA CAAAAGAAGC GTCATTCGCA
AAACTGTTCG CTTCGGAAAT GGGATTCCGC GTTTGCAACC AGGCCATTCA AATTCACGGA
GGCTATGGGT ATATGAAAGA GTACGGAGTC GAGCGCCATT TACGAGACAT CAAACTGATG
GAAATCGGAG AAGGTACGTC AGAAATTCAA CGTCTTGTTA TTGCCCGTCA ACTTGGATGC
TAA
|
|---|
| Protein sequence | MNFELTKEQQ MIKEMVREFA EKEIAPNAAK WDKEAYFPVE VFKKMGELGL LGIPFPEEYG
GAGGDTISYA IAVEEIGRAC GGTGLSYAAA VSLGASPIYY FGTEEQKQKW LVPMAKGETL
GAFGLTEPNA GSDAGGTRTT AVLDGDEYVI NGEKCWITNA EYARQVIVTA VTGKDERGKN
IISAIIVPTD TPGFTIRSNY DKMGVRASNT CELVFENVRV PKENVLGDPK KGFKQFLYTL
DGGRISIAAL AVGIAQAAFE KALQYAKERV QFGQTISKFQ AIQFKLADMA MEIELARNMV
YKAAWLKDQG KPFTKEASFA KLFASEMGFR VCNQAIQIHG GYGYMKEYGV ERHLRDIKLM
EIGEGTSEIQ RLVIARQLGC
|
|---|
| |