Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4054 |
Symbol | |
ID | 5672412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4834185 |
End bp | 4835339 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641242930 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001508347 |
Protein GI | 158315839 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.168546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAGC TCGACCCGGA GGAGCGGGCA GTCGTCGACA CCGTCCGGGA CTTCGTCGAC CGCGAGGTCC GGCCGGTGGT GCGCGAGCTC GAGCACGCCA ACGCCTACCC CGAGGCGCTC ATCGGGCAGA TGAAGCGGCT CGGGGTCTTC GGCCTGGCGA TCCCCGAACC GTACGGCCAG GTGGACGTCT CGACCGTCTG CTACGCCCTG GTGACCGAGG AGCTGGCCCG CGGCTGGATG AGCCTGGCCG GTGCCATGGG CGGGCACACG GTGGTCGCCA AGCTGCTGCT GGCGTTCGGG ACGGAGGAGC AGAAGCGGCG CTACCTGCCG CGGATGGCCA CCGGCGAGCT GCGCGCCACG ATGGCGCTGA CCGAGCCCGG CGGCGGCTCC GACCTGCAGG CGATGCGGAC GACCGCCCGG CCCGACGGCG CGGACTACCT GGTAAACGGC ACCAAGACGT GGATCAGTAA CGCGCGCCGC TCCGGCCTGG TGGCGCTGCT GTGCAAGACC GATCCCGCGG CCGAGCCTGC CCACCGGGGC ATCAGCATCC TGCTGGTGGA GAAGGTCCCC GGGTTCGTGA TCTCCCGGGA CCTGCCCAAG CTGGGCTACA AGGGCGTCGA GAGCTGCGAG CTGTCGTTCA CCGACTGCCG GGTGCCGCGG GACGCGCTGC TCGGCGGGGT CGAGGGCCGG GGCTTCGGGC AGATGATGCG CGGCCTGGAG ATCGGCAGGA TCCAGGTCGC GGCCCGGGCG ACCGGGGTCG GCCGGGCCGC CTTCGACGAC GCCCTGCGCT ACGCCCAGGA GCGCGAGTCG TTCGGCCAGC CGATCTGGCG GCACCAGTCG GTCGGCAACC ATCTCGCGGA GATGGCCACC AAGCTGACGG CGGCCCGCCA GCTGCTGCTG CACGCCGCCC GCCGCTACGA CACGGGCGAG CGCGCCGATC TCGAGGCGGG GATGGCCAAG TTCTTCTGCT CGGAGGTCGC GATGGAGGTG GCGCTGGCCG CGATCCGGGT CCACGGCGGC TACGGGTACT CCACCGAGTT CGACGTCGAG CGCTACTTCC GGGACGCCCC GCTGATGATC GTGGGTGAGG GTACCAACGA GATCCAGCGC AACGTCATCG CCGCCCAGCT CGTCGCGCGG GGCGGCCTGC CGTGA
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Protein sequence | MTELDPEERA VVDTVRDFVD REVRPVVREL EHANAYPEAL IGQMKRLGVF GLAIPEPYGQ VDVSTVCYAL VTEELARGWM SLAGAMGGHT VVAKLLLAFG TEEQKRRYLP RMATGELRAT MALTEPGGGS DLQAMRTTAR PDGADYLVNG TKTWISNARR SGLVALLCKT DPAAEPAHRG ISILLVEKVP GFVISRDLPK LGYKGVESCE LSFTDCRVPR DALLGGVEGR GFGQMMRGLE IGRIQVAARA TGVGRAAFDD ALRYAQERES FGQPIWRHQS VGNHLAEMAT KLTAARQLLL HAARRYDTGE RADLEAGMAK FFCSEVAMEV ALAAIRVHGG YGYSTEFDVE RYFRDAPLMI VGEGTNEIQR NVIAAQLVAR GGLP
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