More than 300 homologs were found in PanDaTox collection
for query gene Lcho_0847 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_0847  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
386 aa  785    Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010678  Rpic_4539  acyl-CoA dehydrogenase domain protein  76.3 
 
 
385 aa  615  1e-175  Ralstonia pickettii 12J  Bacteria  normal  0.452852  normal  0.739278 
 
 
-
 
NC_007974  Rmet_5908  acyl-CoA dehydrogenase-like protein  75.78 
 
 
385 aa  614  1e-175  Cupriavidus metallidurans CH34  Bacteria  normal  0.276142  normal 
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  76.3 
 
 
385 aa  615  1e-175  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_007348  Reut_B5319  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  74.48 
 
 
385 aa  612  9.999999999999999e-175  Ralstonia eutropha JMP134  Bacteria  normal  0.398534  n/a   
 
 
-
 
NC_003296  RS01762  putative acyl-CoA dehydrogenase oxidoreductase protein  76.3 
 
 
385 aa  610  1e-173  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.272038 
 
 
-
 
NC_008781  Pnap_2129  Acyl-CoA dehydrogenase  74.55 
 
 
386 aa  607  9.999999999999999e-173  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0260778 
 
 
-
 
NC_010524  Lcho_1191  acyl-CoA dehydrogenase domain-containing protein  74.67 
 
 
386 aa  602  1.0000000000000001e-171  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009484  Acry_1556  acyl-CoA dehydrogenase domain-containing protein  74.41 
 
 
386 aa  603  1.0000000000000001e-171  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  61.08 
 
 
384 aa  495  1e-139  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  61.08 
 
 
385 aa  488  1e-137  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  61.08 
 
 
385 aa  488  1e-136  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  60.31 
 
 
384 aa  481  1e-135  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  60.05 
 
 
385 aa  481  1e-134  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_004311  BRA1088  acyl-CoA dehydrogenase  60.52 
 
 
380 aa  477  1e-133  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  59.02 
 
 
383 aa  476  1e-133  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  60.31 
 
 
384 aa  475  1e-133  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  60.57 
 
 
384 aa  476  1e-133  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  58.29 
 
 
383 aa  470  1.0000000000000001e-131  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  57.88 
 
 
384 aa  466  9.999999999999999e-131  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  57.88 
 
 
384 aa  466  9.999999999999999e-131  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  57.95 
 
 
386 aa  463  1e-129  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  57.11 
 
 
382 aa  443  1e-123  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  56.07 
 
 
382 aa  440  9.999999999999999e-123  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_009720  Xaut_0909  acyl-CoA dehydrogenase domain-containing protein  56.19 
 
 
388 aa  430  1e-119  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1816  acyl-CoA dehydrogenase-like protein  53.87 
 
 
429 aa  411  1e-113  Cupriavidus metallidurans CH34  Bacteria  normal  0.0196409  hitchhiker  0.006326 
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  51.8 
 
 
398 aa  392  1e-108  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  53.35 
 
 
388 aa  393  1e-108  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  52.09 
 
 
418 aa  392  1e-108  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_6218  acyl-CoA dehydrogenase domain protein  52.73 
 
 
390 aa  390  1e-107  Variovorax paradoxus S110  Bacteria  normal  0.823092  n/a   
 
 
-
 
NC_013757  Gobs_1375  acyl-CoA dehydrogenase domain protein  51.55 
 
 
384 aa  380  1e-104  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_3010  acyl-CoA dehydrogenase-like protein  49.61 
 
 
387 aa  378  1e-104  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.157219 
 
 
-
 
NC_007794  Saro_1224  acyl-CoA dehydrogenase-like  49.22 
 
 
394 aa  375  1e-103  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0161366  n/a   
 
 
-
 
NC_013441  Gbro_4184  acyl-CoA dehydrogenase domain protein  51.56 
 
 
390 aa  377  1e-103  Gordonia bronchialis DSM 43247  Bacteria  normal  0.948009  n/a   
 
 
-
 
NC_009921  Franean1_2710  acyl-CoA dehydrogenase domain-containing protein  50.52 
 
 
395 aa  378  1e-103  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3930  acyl-CoA dehydrogenase domain-containing protein  51.19 
 
 
385 aa  367  1e-100  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0411302 
 
 
-
 
NC_009338  Mflv_4370  acyl-CoA dehydrogenase domain-containing protein  50.13 
 
 
404 aa  365  1e-100  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1974  acyl-CoA dehydrogenase domain-containing protein  50.13 
 
 
392 aa  362  5.0000000000000005e-99  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.204851  normal 
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  50 
 
 
395 aa  362  8e-99  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1737  acyl-CoA dehydrogenase domain-containing protein  49.74 
 
 
391 aa  359  4e-98  Mycobacterium sp. JLS  Bacteria  normal  0.375234  normal 
 
 
-
 
NC_008146  Mmcs_1756  acyl-CoA dehydrogenase-like protein  49.74 
 
 
391 aa  359  4e-98  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1803  acyl-CoA dehydrogenase domain-containing protein  49.74 
 
 
391 aa  359  4e-98  Mycobacterium sp. KMS  Bacteria  normal  0.992024  normal  0.411519 
 
 
-
 
NC_010002  Daci_1165  acyl-CoA dehydrogenase domain-containing protein  48 
 
 
389 aa  356  2.9999999999999997e-97  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_26310  acyl-CoA dehydrogenase  48.83 
 
 
394 aa  355  5.999999999999999e-97  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.953761 
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  43.54 
 
 
386 aa  320  1.9999999999999998e-86  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  43.92 
 
 
388 aa  315  9.999999999999999e-85  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_008025  Dgeo_0428  acyl-CoA dehydrogenase-like protein  43.49 
 
 
380 aa  299  4e-80  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.871589  normal  0.2576 
 
 
-
 
NC_008699  Noca_4293  acyl-CoA dehydrogenase domain-containing protein  41.32 
 
 
383 aa  282  5.000000000000001e-75  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2511  acyl-CoA dehydrogenase  41.32 
 
 
381 aa  281  1e-74  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2560  acyl-CoA dehydrogenase  41.05 
 
 
381 aa  281  1e-74  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.1486499999999994e-20 
 
 
-
 
NC_005957  BT9727_2327  acyl-CoA dehydrogenase  41.05 
 
 
381 aa  281  1e-74  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2812  acyl-CoA dehydrogenase  41.32 
 
 
381 aa  281  1e-74  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000163693 
 
 
-
 
NC_003909  BCE_2548  acyl-CoA dehydrogenase  41.05 
 
 
381 aa  281  2e-74  Bacillus cereus ATCC 10987  Bacteria  normal  0.438014  n/a   
 
 
-
 
NC_011658  BCAH187_A2603  acyl-CoA dehydrogenase  41.05 
 
 
381 aa  281  2e-74  Bacillus cereus AH187  Bacteria  normal  0.608519  n/a   
 
 
-
 
NC_006274  BCZK2285  acyl-CoA dehydrogenase  41.05 
 
 
381 aa  281  2e-74  Bacillus cereus E33L  Bacteria  normal  0.769883  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2355  acyl-CoA dehydrogenase domain-containing protein  41.16 
 
 
381 aa  280  2e-74  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.774843  n/a   
 
 
-
 
NC_005945  BAS2369  acyl-CoA dehydrogenase  41.05 
 
 
381 aa  280  3e-74  Bacillus anthracis str. Sterne  Bacteria  normal  0.73982  n/a   
 
 
-
 
NC_007530  GBAA_2547  acyl-CoA dehydrogenase  40.79 
 
 
381 aa  279  8e-74  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1802  acyl-CoA dehydrogenase domain-containing protein  40.53 
 
 
381 aa  277  2e-73  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1804  butyryl-CoA dehydrogenase  41.92 
 
 
386 aa  274  2.0000000000000002e-72  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  38.24 
 
 
381 aa  273  5.000000000000001e-72  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  40.53 
 
 
389 aa  271  2e-71  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  40.11 
 
 
377 aa  268  1e-70  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_014165  Tbis_0714  acyl-CoA dehydrogenase domain-containing protein  39.63 
 
 
388 aa  268  2e-70  Thermobispora bispora DSM 43833  Bacteria  normal  0.114203  normal  0.0860013 
 
 
-
 
NC_008025  Dgeo_0736  acyl-CoA dehydrogenase-like protein  38.96 
 
 
379 aa  266  4e-70  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.763418 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  39.26 
 
 
379 aa  266  5.999999999999999e-70  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1777  putative acyl-CoA dehydrogenase  42.44 
 
 
383 aa  264  2e-69  Thermobifida fusca YX  Bacteria  normal  0.0345355  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  40 
 
 
380 aa  263  4e-69  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  39.74 
 
 
380 aa  263  4.999999999999999e-69  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6302  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  38.89 
 
 
378 aa  259  7e-68  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  36.44 
 
 
388 aa  258  1e-67  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  39.1 
 
 
400 aa  258  1e-67  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_008228  Patl_0949  acyl-CoA dehydrogenase-like  37.86 
 
 
385 aa  258  2e-67  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0416018  n/a   
 
 
-
 
NC_007952  Bxe_B1084  butyryl-CoA dehydrogenase  37.11 
 
 
377 aa  256  3e-67  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0155468 
 
 
-
 
NC_013131  Caci_7768  acyl-CoA dehydrogenase domain protein  38.79 
 
 
397 aa  256  4e-67  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_5126  acyl-CoA dehydrogenase domain-containing protein  38.44 
 
 
377 aa  256  4e-67  Burkholderia phymatum STM815  Bacteria  normal  normal  0.393324 
 
 
-
 
NC_010676  Bphyt_5650  acyl-CoA dehydrogenase domain protein  37.11 
 
 
377 aa  256  6e-67  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  36.44 
 
 
388 aa  256  6e-67  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  36.7 
 
 
379 aa  254  1.0000000000000001e-66  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  38.62 
 
 
379 aa  254  1.0000000000000001e-66  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  37.99 
 
 
382 aa  255  1.0000000000000001e-66  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_007925  RPC_3093  acyl-CoA dehydrogenase-like  37.77 
 
 
382 aa  255  1.0000000000000001e-66  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.224598 
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  37.4 
 
 
380 aa  255  1.0000000000000001e-66  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2336  acyl-CoA dehydrogenase domain-containing protein  41.45 
 
 
385 aa  254  2.0000000000000002e-66  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0364  acyl-CoA dehydrogenase domain protein  38.64 
 
 
386 aa  254  2.0000000000000002e-66  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_3652  acyl-CoA dehydrogenase domain protein  40.15 
 
 
584 aa  254  2.0000000000000002e-66  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4272  acyl-CoA dehydrogenase domain protein  40.7 
 
 
580 aa  254  2.0000000000000002e-66  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6770  acyl-CoA dehydrogenase domain protein  40.8 
 
 
390 aa  254  2.0000000000000002e-66  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.210456  normal  0.358603 
 
 
-
 
NC_007511  Bcep18194_B0714  Acyl-CoA dehydrogenase  39.31 
 
 
377 aa  253  3e-66  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  35.96 
 
 
402 aa  253  3e-66  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  39.63 
 
 
375 aa  253  3e-66  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_003909  BCE_2380  acyl-CoA dehydrogenase  37.56 
 
 
569 aa  253  4.0000000000000004e-66  Bacillus cereus ATCC 10987  Bacteria  normal  0.0460378  n/a   
 
 
-
 
NC_005957  BT9727_2128  acyl-CoA dehydrogenase  37.05 
 
 
569 aa  253  4.0000000000000004e-66  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.422532  n/a   
 
 
-
 
NC_006274  BCZK2114  acyl-CoA dehydrogenase  37.05 
 
 
569 aa  253  4.0000000000000004e-66  Bacillus cereus E33L  Bacteria  normal  0.575523  n/a   
 
 
-
 
NC_007333  Tfu_1647  acyl-CoA dehydrogenase  35.28 
 
 
385 aa  253  4.0000000000000004e-66  Thermobifida fusca YX  Bacteria  normal  0.658516  n/a   
 
 
-
 
NC_011658  BCAH187_A2453  acyl-CoA dehydrogenase  37.05 
 
 
569 aa  253  4.0000000000000004e-66  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0249  acyl-CoA dehydrogenase domain-containing protein  39.26 
 
 
383 aa  253  4.0000000000000004e-66  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.538468  normal  0.417839 
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  36.18 
 
 
386 aa  252  7e-66  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4249  acyl-CoA dehydrogenase domain protein  40.41 
 
 
580 aa  252  7e-66  Anaeromyxobacter sp. K  Bacteria  normal  0.808927  n/a   
 
 
-
 
NC_013510  Tcur_2510  acyl-CoA dehydrogenase domain protein  36.91 
 
 
397 aa  252  7e-66  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0195405  n/a   
 
 
-
 
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