Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1613 |
Symbol | |
ID | 5455219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1748130 |
End bp | 1749836 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640877186 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001412889 |
Protein GI | 154252065 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.10785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA CCCAGAGCGC CGCCTCCGCA TCCCGCACGG GCGCCAATGC CGACCTTCTG CTTGCCGATC TGCTGCTGCT GACGGGGCAG GCGGTGGAGG CGGCGAACAA GCTGCTCGCC CAGGCGAAAA CAGCCGTGTT CGCCAAGGTG GCGAAGGACG GCAAGGTTTC GGCGGCGGCA ATCGAGCGCG AACAATTTGC GGTGCATGGC TTTGCCTGGC TGGCAACCTA TGTGGAGGCG CTGCGCCAGC TTGCCGCCTA TGCCGCGCGG ATGACCGAAG AGGGACGCTT CGGCGAGTTC GAGGCGCTGA TCGTGCAATT CGCCTTCGGC GAATATCTGA ACCAGATTTC CGGCGGCATT CCGATGAGCC AGGTGGAGAC GGTCCGGCCG CTCGATCTCG GCATTTCAGA TGGCGACCAT GCAGGCTTCC ACACCGAAGC CGTGCGTACG CTTTGCGCGG CAGGCAACAC GCGCGGAACG CGCGCGCGGC TCGCCGAACT CATCGCGGCG AATGCGGGCG CGGCGACCTT CGGCGACACG GGGCTTGAGG AAACCTACGA CGCAATCCGC GACCAGATGC GCCGCTTCGC CGATGCCGAA GTCATGCCCC ATGCGCATGA GTGGCATCTG AAGGACGACT ACATTCCGAT GCCCGTGGTC AAACAGATGG CGGAGCTTGG CGTCTTCGGC CTGACGATCC CGGAAGAATT CGGCGGGCTC GGCCTCGGCA AGGAATCCAT GTGCGTCGTC TCCGAGGAAT TGAGCCGGGG CTATATCGGC GTCGGCTCGC TCGGCACGCG CTCCGAAATC GCGGCCGAGC TGATCCTTGG CGGCGGCACG AAGGAACAGA AGGACAAGTG GCTGCCGAAG ATCGCGAGCG GCGAAGTGCT GCCGACGGCG GTCTTCACCG AGCCGAACAC GGGCTCCGAT CTTGCCAGCC TGAAGACGCG CGGCAAGCGC GACGGCGACG TCTACAAGGT GAACGGCAAC AAGACATGGA TCACGCATGC GGCGCGCGCC GATGTGATGA CGCTGCTCTG CCGCACCAAT GACGAGCCGG GCTACAAGGG ACTGTCCATG CTGCTGGCCG AAAAGCCGCG CGGTGGCGAC GAAGAGCCCT TCCCGGCGAA GGGCATGTCC GGCGGCGAAA TCGAGGTACT CGGCTATCGC GGCATGAAGG AATTCGAAAT CGGTTTCGAC GATTTCGAGG TGAAGGCGGA GAACCTTCTG GGCGGCGAGG AAGGCCAGGG CTTCAAGCAG CTCATGCAGA CCTTTGAGAG CGCCCGCATC CAGACGGCGG CGCGCGCTGT CGGCGTTGCA CAATCTGCGC TCGAACTCGG ACTTCGCTAC GCGCAGGACC GCATCCAGTT CGGCAAGCCG ATCTACGACT TCCCCCGCGT GAACGGCAAG CTCGTCATGA TGGCGGTCGA GATCATGGTG GCGCGCCAGC TTACTTATTT TGCCGCGCGC GAAAAGGACG GCGGCAGGCG CTGCGACCTT GAGGCGGGAA TGGCAAAGCT TCTCGCCGCG CGCATCGCCT GGGCGGCGGC GGACAATGCG CTGCAGATCC ATGGCGGCAA CGGCTTCGCA CTTGAATATC CGGTAAGCCG CGTGCTGTGC GACGCGCGCA TCCTCAACAT CTTTGAAGGC GCGGCCGAAA TCCAGGCACA GGTAATCGCC CGCCGCCTGC TGGAAGGCGG AAACTGA
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Protein sequence | MSQTQSAASA SRTGANADLL LADLLLLTGQ AVEAANKLLA QAKTAVFAKV AKDGKVSAAA IEREQFAVHG FAWLATYVEA LRQLAAYAAR MTEEGRFGEF EALIVQFAFG EYLNQISGGI PMSQVETVRP LDLGISDGDH AGFHTEAVRT LCAAGNTRGT RARLAELIAA NAGAATFGDT GLEETYDAIR DQMRRFADAE VMPHAHEWHL KDDYIPMPVV KQMAELGVFG LTIPEEFGGL GLGKESMCVV SEELSRGYIG VGSLGTRSEI AAELILGGGT KEQKDKWLPK IASGEVLPTA VFTEPNTGSD LASLKTRGKR DGDVYKVNGN KTWITHAARA DVMTLLCRTN DEPGYKGLSM LLAEKPRGGD EEPFPAKGMS GGEIEVLGYR GMKEFEIGFD DFEVKAENLL GGEEGQGFKQ LMQTFESARI QTAARAVGVA QSALELGLRY AQDRIQFGKP IYDFPRVNGK LVMMAVEIMV ARQLTYFAAR EKDGGRRCDL EAGMAKLLAA RIAWAAADNA LQIHGGNGFA LEYPVSRVLC DARILNIFEG AAEIQAQVIA RRLLEGGN
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