Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4031 |
Symbol | |
ID | 5672389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4806800 |
End bp | 4807999 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641242907 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001508324 |
Protein GI | 158315816 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.328111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.707323 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCAGGA TCGCGCAGAC CGATGGGCTG ACCGAGGTGC AGTCCGACAT CCTCGCGGCG GTGCGGTCGT TCGTGGACAA GGAGATCCTG CCGAACGCGG GCGATCTTGA GCGTAAGGAC GAGTATCCCG AGGCGATCGT CGAGGCGATG AAGGAGATGG GCCTGTTCGG GATCACCATC CCGGAGCAGT ACGGCGGTCT CGGTGAGTCG TTGTTGACGT ACGCGCTGGT GGTGGAGGAG ATCGCCCGCG GGTGGATGAG TGTGTCCGGG GTGATCAACA CTCATTTCAT CGTGGCGTAT CTGGTGTTGC AGCACGGTAC CGACGAGCAG CGGGAGCGGT TGTTGCCGCG GATGGCGACC GGTGAGCTGC GTGGGGCGTT CTCGATGAGT GAGCCGGGGT GTGGTTCGGA TGTGTCGGCG ATCACGACCC GGGCTGGCCG TGACGGCGAC GAGTACACGA TCACCGGGCA GAAGATGTGG CTGACCAACG GTGCCCGTGC GGGTCTGGTC GCGACGTTGG TGAAGACGGA TGAGGGTGCG GAGTCGGTCT ATCGGAACAT GACGACGTTC CTGTTGGAGA AGGAGCCGGG GTTTGGTACC GACGGTGGTA TCACGATTCC CGGGAAGCTG GAGAAGCTCG GGTACAAGGG TGTCGAGACC ACGGAGATGA TCCTGGATGG TCATCGGGTG CCGGCGAGTT CGATCCTGGG TGGCCCCGGG GGGGCGGGTC GTGGTTTCTA CCAGATGATG GATGGGGTGG AGGTCGGGCG GGTCAACGTC GCGGCCCGTG CCTGCGGGAT CATGATCCGG GCGTTCGAGT TGGCGATCGC CTACGCTCAG CAGCGGCGGA CGTTCGGCCA TCAGATCGCC GATCATCAGG CGATCGCGTT CAAGCTCGCG GACATGGCGA CCAAGGTCGA GGCGGGTCAT CTGATGATGG TCAACGCCGC GCGTAAGAAG GACAGCGGGC AGCGTAACGA CGTCGAGGCC GGGATGGCGA AGTACCTGGC CAGTGAGTAC TGCCATGAGG TGACCACCGA GTCGTTCCGG ATCCACGGCG GCTACGGGTA CTCCAAGGAG TACGAGATCG AGCGTCTCTA CCGGGAGGCC CCGTTCATGC TCATCGGCGA GGGGACGTCC GAGGTGCAGA AGCGCATCAT CAGCCGCGCC CTGCTCAAGG AATACAAGCT GCGAGGCTGA
|
Protein sequence | MGRIAQTDGL TEVQSDILAA VRSFVDKEIL PNAGDLERKD EYPEAIVEAM KEMGLFGITI PEQYGGLGES LLTYALVVEE IARGWMSVSG VINTHFIVAY LVLQHGTDEQ RERLLPRMAT GELRGAFSMS EPGCGSDVSA ITTRAGRDGD EYTITGQKMW LTNGARAGLV ATLVKTDEGA ESVYRNMTTF LLEKEPGFGT DGGITIPGKL EKLGYKGVET TEMILDGHRV PASSILGGPG GAGRGFYQMM DGVEVGRVNV AARACGIMIR AFELAIAYAQ QRRTFGHQIA DHQAIAFKLA DMATKVEAGH LMMVNAARKK DSGQRNDVEA GMAKYLASEY CHEVTTESFR IHGGYGYSKE YEIERLYREA PFMLIGEGTS EVQKRIISRA LLKEYKLRG
|
| |