More than 300 homologs were found in PanDaTox collection
for query gene Plav_1078 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
383 aa  781    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  69.47 
 
 
382 aa  549  1e-155  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  66.84 
 
 
382 aa  544  1e-153  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  64.49 
 
 
384 aa  538  9.999999999999999e-153  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  64.3 
 
 
384 aa  536  1e-151  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  64.83 
 
 
384 aa  537  1e-151  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  65.26 
 
 
385 aa  531  1e-150  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  65.26 
 
 
385 aa  531  1e-150  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  63.19 
 
 
384 aa  528  1e-149  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  63.19 
 
 
384 aa  528  1e-149  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  64.21 
 
 
385 aa  525  1e-148  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  62.89 
 
 
383 aa  511  1e-144  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_009720  Xaut_0909  acyl-CoA dehydrogenase domain-containing protein  63.76 
 
 
388 aa  507  9.999999999999999e-143  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  60.79 
 
 
384 aa  501  1e-141  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  60 
 
 
386 aa  504  1e-141  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_007348  Reut_B5319  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  61.92 
 
 
385 aa  499  1e-140  Ralstonia eutropha JMP134  Bacteria  normal  0.398534  n/a   
 
 
-
 
NC_004311  BRA1088  acyl-CoA dehydrogenase  61.42 
 
 
380 aa  497  1e-139  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5908  acyl-CoA dehydrogenase-like protein  61.4 
 
 
385 aa  496  1e-139  Cupriavidus metallidurans CH34  Bacteria  normal  0.276142  normal 
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  60.36 
 
 
385 aa  485  1e-136  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_010678  Rpic_4539  acyl-CoA dehydrogenase domain protein  60.36 
 
 
385 aa  485  1e-136  Ralstonia pickettii 12J  Bacteria  normal  0.452852  normal  0.739278 
 
 
-
 
NC_003296  RS01762  putative acyl-CoA dehydrogenase oxidoreductase protein  60.1 
 
 
385 aa  479  1e-134  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.272038 
 
 
-
 
NC_010524  Lcho_1191  acyl-CoA dehydrogenase domain-containing protein  59.22 
 
 
386 aa  472  1e-132  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009484  Acry_1556  acyl-CoA dehydrogenase domain-containing protein  60.88 
 
 
386 aa  473  1e-132  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2129  Acyl-CoA dehydrogenase  59.07 
 
 
386 aa  471  1e-132  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0260778 
 
 
-
 
NC_010524  Lcho_0847  acyl-CoA dehydrogenase domain-containing protein  58.29 
 
 
386 aa  470  1.0000000000000001e-131  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007973  Rmet_1816  acyl-CoA dehydrogenase-like protein  53.46 
 
 
429 aa  426  1e-118  Cupriavidus metallidurans CH34  Bacteria  normal  0.0196409  hitchhiker  0.006326 
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  53.97 
 
 
418 aa  422  1e-117  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1375  acyl-CoA dehydrogenase domain protein  53.44 
 
 
384 aa  415  9.999999999999999e-116  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  52.39 
 
 
388 aa  412  1e-114  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_012792  Vapar_6218  acyl-CoA dehydrogenase domain protein  51.83 
 
 
390 aa  413  1e-114  Variovorax paradoxus S110  Bacteria  normal  0.823092  n/a   
 
 
-
 
NC_009921  Franean1_3930  acyl-CoA dehydrogenase domain-containing protein  53.95 
 
 
385 aa  411  1e-114  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0411302 
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  51.34 
 
 
398 aa  404  1e-111  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1165  acyl-CoA dehydrogenase domain-containing protein  50.67 
 
 
389 aa  403  1e-111  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_3010  acyl-CoA dehydrogenase-like protein  49.6 
 
 
387 aa  403  1e-111  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.157219 
 
 
-
 
NC_009921  Franean1_2710  acyl-CoA dehydrogenase domain-containing protein  52.94 
 
 
395 aa  401  9.999999999999999e-111  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  50.13 
 
 
395 aa  400  9.999999999999999e-111  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_1224  acyl-CoA dehydrogenase-like  51.45 
 
 
394 aa  398  9.999999999999999e-111  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0161366  n/a   
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  48.92 
 
 
388 aa  374  1e-102  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_013441  Gbro_4184  acyl-CoA dehydrogenase domain protein  48.91 
 
 
390 aa  372  1e-102  Gordonia bronchialis DSM 43247  Bacteria  normal  0.948009  n/a   
 
 
-
 
NC_009338  Mflv_4370  acyl-CoA dehydrogenase domain-containing protein  46.86 
 
 
404 aa  370  1e-101  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1974  acyl-CoA dehydrogenase domain-containing protein  48.27 
 
 
392 aa  371  1e-101  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.204851  normal 
 
 
-
 
NC_009077  Mjls_1737  acyl-CoA dehydrogenase domain-containing protein  48.16 
 
 
391 aa  358  9e-98  Mycobacterium sp. JLS  Bacteria  normal  0.375234  normal 
 
 
-
 
NC_008146  Mmcs_1756  acyl-CoA dehydrogenase-like protein  48.16 
 
 
391 aa  358  9e-98  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1803  acyl-CoA dehydrogenase domain-containing protein  48.16 
 
 
391 aa  358  9e-98  Mycobacterium sp. KMS  Bacteria  normal  0.992024  normal  0.411519 
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  47.85 
 
 
386 aa  355  5e-97  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013159  Svir_26310  acyl-CoA dehydrogenase  44.82 
 
 
394 aa  349  5e-95  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.953761 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  41.94 
 
 
388 aa  315  6e-85  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  42.2 
 
 
388 aa  314  1.9999999999999998e-84  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_008025  Dgeo_0428  acyl-CoA dehydrogenase-like protein  44.29 
 
 
380 aa  309  5e-83  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.871589  normal  0.2576 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  41.07 
 
 
379 aa  300  3e-80  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2382  acyl-CoA dehydrogenase domain protein  41.4 
 
 
389 aa  298  1e-79  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  42.36 
 
 
389 aa  296  5e-79  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  40.48 
 
 
381 aa  295  1e-78  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  41.29 
 
 
376 aa  293  2e-78  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  41.29 
 
 
376 aa  293  2e-78  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  41.29 
 
 
376 aa  293  3e-78  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  41.29 
 
 
376 aa  293  3e-78  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  41.29 
 
 
376 aa  293  3e-78  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  41.29 
 
 
381 aa  293  3e-78  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  40.42 
 
 
379 aa  293  4e-78  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  40.96 
 
 
375 aa  293  4e-78  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  41.82 
 
 
376 aa  293  5e-78  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  41.02 
 
 
381 aa  291  1e-77  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  41.02 
 
 
376 aa  291  2e-77  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4293  acyl-CoA dehydrogenase domain-containing protein  40.17 
 
 
383 aa  291  2e-77  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  39.78 
 
 
379 aa  290  4e-77  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_009720  Xaut_4666  acyl-CoA dehydrogenase domain-containing protein  43.7 
 
 
375 aa  290  4e-77  Xanthobacter autotrophicus Py2  Bacteria  normal  0.815528  normal  0.395379 
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  40.11 
 
 
402 aa  289  6e-77  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  40.48 
 
 
381 aa  288  8e-77  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  40.21 
 
 
375 aa  288  1e-76  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  40.44 
 
 
379 aa  288  1e-76  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_009512  Pput_3522  acyl-CoA dehydrogenase domain-containing protein  40.21 
 
 
375 aa  288  1e-76  Pseudomonas putida F1  Bacteria  normal  normal  0.0559083 
 
 
-
 
NC_008346  Swol_0488  butyryl-CoA dehydrogenase  39.1 
 
 
379 aa  288  1e-76  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00678793  n/a   
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  40.48 
 
 
377 aa  286  2.9999999999999996e-76  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  41.02 
 
 
378 aa  286  2.9999999999999996e-76  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_010322  PputGB1_1842  acyl-CoA dehydrogenase domain-containing protein  40.69 
 
 
375 aa  286  4e-76  Pseudomonas putida GB-1  Bacteria  normal  0.0292697  normal  0.208883 
 
 
-
 
NC_011004  Rpal_2548  acyl-CoA dehydrogenase domain protein  43.16 
 
 
375 aa  286  4e-76  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.314153  n/a   
 
 
-
 
NC_007958  RPD_3106  acyl-CoA dehydrogenase-like  43.12 
 
 
375 aa  286  5e-76  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0271451 
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  39.34 
 
 
381 aa  285  8e-76  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  40.48 
 
 
376 aa  285  9e-76  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0714  Acyl-CoA dehydrogenase  41.91 
 
 
377 aa  284  2.0000000000000002e-75  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3106  acyl-CoA dehydrogenase domain-containing protein  43.09 
 
 
375 aa  284  2.0000000000000002e-75  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.332334  n/a   
 
 
-
 
NC_013411  GYMC61_3451  acyl-CoA dehydrogenase domain protein  41.82 
 
 
377 aa  284  2.0000000000000002e-75  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013744  Htur_4358  acyl-CoA dehydrogenase domain protein  39.68 
 
 
381 aa  284  2.0000000000000002e-75  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0892384  n/a   
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  39.36 
 
 
379 aa  283  3.0000000000000004e-75  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  38.42 
 
 
380 aa  283  3.0000000000000004e-75  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0364  acyl-CoA dehydrogenase domain protein  40 
 
 
386 aa  283  5.000000000000001e-75  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  39.27 
 
 
386 aa  283  5.000000000000001e-75  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  38.4 
 
 
379 aa  282  6.000000000000001e-75  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  38.4 
 
 
379 aa  282  6.000000000000001e-75  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0391  acyl-CoA dehydrogenase  42.55 
 
 
375 aa  281  9e-75  Brucella ovis ATCC 25840  Bacteria  normal  0.31925  n/a   
 
 
-
 
NC_004311  BRA0447  acyl-CoA dehydrogenase  42.55 
 
 
375 aa  281  1e-74  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  39.84 
 
 
380 aa  281  1e-74  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  40.82 
 
 
376 aa  281  1e-74  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_013131  Caci_6770  acyl-CoA dehydrogenase domain protein  39.67 
 
 
390 aa  281  2e-74  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.210456  normal  0.358603 
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  40 
 
 
376 aa  281  2e-74  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_014165  Tbis_1804  butyryl-CoA dehydrogenase  39.84 
 
 
386 aa  281  2e-74  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  39.02 
 
 
379 aa  280  4e-74  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3404  acyl-CoA dehydrogenase-like  41.38 
 
 
377 aa  279  7e-74  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4963  acyl-CoA dehydrogenase domain-containing protein  41.38 
 
 
377 aa  279  7e-74  Burkholderia cenocepacia HI2424  Bacteria  normal  0.398605  normal  0.378723 
 
 
-
 
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