| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1456 |
|---|
| Symbol | |
|---|
| ID | 4597224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1543771 |
|---|
| End bp | 1544967 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639776054 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_922657 |
|---|
| Protein GI | 119715692 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGCC TGTGTGAGAC CGAGGGACTG ACCGAGGACC AGACCGAGAT CCTCAAGGCC
GTCCGCGCGT TCGTGGAGGA GCGGATCCTC CCGGTCGCGA CCGAGCTGGA GCACGCGGAC
GAGTATCCGC AGGAGATCGT CGACGGGCTC AAGGAGCTCG GCATCTTCGG GCTCACGATC
CCCGAGGAGT ACGACGGCCT GGGCGAGTCG CTGCTGACCT ATGCGCTGTG CGTGGAGGAG
ATCGCGCGCG GCTGGATGAG CGTGTCCGGG GTGATCAACA CCCACTTCAT CGTGGCCTAC
ATGCTGATGA AGCACGGCAC GGAGGAGCAG AAGCGCAAGT ACCTGCCGAA GATGGCGACC
GGCGAGATCC GGGGTGCGTT CTCCATGTCG GAGCCCGGCC TGGGCTCCGA CGTGTCGGCG
GTGAAGACCA AGGCCACCAA GACCGACGGC GGCTACACGA TCGACGGCCA GAAGATGTGG
CTGACCAACG GCGGCACCTC CAACCTGGTC GCGGTCCTGG CGCGGACCGA TGAGGGTGCG
GACTCGGTGT ACAAGAACAT GACGACGTTC CTGGTCGAGA AGGAGCCGGG CTTCGGGGAG
ACCGCGCCCG GGCTGACCAT CCCGGGCAAG CTGGACAAGA TGGGCTACAA GGGCGTGGAG
ACCACCGAGG CGGTCTTCGA GGGCCACCAG GTCTCCGACG ACCAGGTCCT GGGCGGTGCT
CCGGGCCAGG GCTTCTACCA GATGATGGAC GGCGTCGAGG TCGGCCGCGT CAACGTCGCG
GCCCGGGCCG TGGGCATCGC CAACCGCGCG TTCGAGCTGG CCATCGCCTA CGCCCAGCAG
CGCGAGACCT TCGGCAAGCC GATCGCGCAG CACCAGGCGA TCCTGTTCCG GCTCGCGGAG
ATGGCGACCA AGGTCGAGAC CGCGCACGCG ATGATGGTCA AGGCGGCCCG CCTCAAGGAC
CGCGGCGAGC GCAACGACGT CGAGGCCGGG ATGGCCAAGA TGGTGGCGGC GGAGTACTGC
AACGAGGTGG TCCAGGACTC CTTCCGGATC CACGGCGGCT ACGGCTACTC CAAGGAGTAC
GAGATCGAGC GGCTGTACCG CGAGGCGGCG TTCATGCTGA TCGGCGAGGG CACCTCGGAC
ATCCAGAAGA TGATCATCGG CCGCTCACTG CTCAAGGACT ACCAGCTGAA GGGCTGA
|
|---|
| Protein sequence | MGRLCETEGL TEDQTEILKA VRAFVEERIL PVATELEHAD EYPQEIVDGL KELGIFGLTI
PEEYDGLGES LLTYALCVEE IARGWMSVSG VINTHFIVAY MLMKHGTEEQ KRKYLPKMAT
GEIRGAFSMS EPGLGSDVSA VKTKATKTDG GYTIDGQKMW LTNGGTSNLV AVLARTDEGA
DSVYKNMTTF LVEKEPGFGE TAPGLTIPGK LDKMGYKGVE TTEAVFEGHQ VSDDQVLGGA
PGQGFYQMMD GVEVGRVNVA ARAVGIANRA FELAIAYAQQ RETFGKPIAQ HQAILFRLAE
MATKVETAHA MMVKAARLKD RGERNDVEAG MAKMVAAEYC NEVVQDSFRI HGGYGYSKEY
EIERLYREAA FMLIGEGTSD IQKMIIGRSL LKDYQLKG
|
|---|
| |