| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0530 |
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| Symbol | |
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| ID | 3932971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 519783 |
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| End bp | 521465 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902875 |
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| Product | Acyl-CoA dehydrogenase |
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| Protein accession | YP_508472 |
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| Protein GI | 89053021 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCG ACGCCCAACA GCAACCCGAG ACCGCCGTGA TTCTCTCTGA TCTTCTTGCC
CTGACCAGTT CCGCCGTCGC CCCCGCCGAG GCGCTTCTGA ACAAGGCCAA ATCCCACCTG
CGCTATGTGC TGTCCGAGGG TGGCCGGATT TCTGCCCCGC TGATCGAGCG AAACCAGACC
GCCGCTCACG GCCTTGCCTG GCTGGCAACA TATGTCGAAT CCCTGCGGCA GATGCAGGGA
TGGGCCGAGC GTCTGGATGC TGACGGCAAG TTTGGCGAGA TCGAGCAACT GATCCTGCAA
ATCACCTTCG GCGAATACCT TTGGCAGATC TACGGCGGCA TTCCGATGAG CCAGGGCGAA
ATCCTGCGCC TTCAGGACAT CGGGTTGAGC CAGGACGATC AACGCGCGCT GATGGACGAC
GCGGTGATGA CCCTTACGGC CAGCGGCAAC ACGCAAGCCG CCCGCACGCG CCTGGTCGAG
TTGATGCAGG ACCGCGCCGC CGAAGTCACC GTAGGCGCCT GTGGTCTGGA TGAAGAACTC
GACATGATCC GCGAGCAATT CCGCCGCTAC GCCGTCGACC GCGTCATTCC CAACGCCCAC
GACTGGCACC TGAACGATGA GCTGATCCCG ATGGACATCA TCGAAGACCT GTCCGAGATG
GGCGTCTTCG GCCTGACGAT CCCGGAAGAG CATGGTGGTC TGGGCATGTC CAAAGCGTCC
ATGTGCGTCG TCTCCGAGGA GCTGTCGCGC GGCTACATCG GCGTGGGGTC CCTCGCGACT
CGGTCAGAGA TCGCGGCCGA GTTGATTCTG GCCGGCGGCA CGGACGACCA GAAGGCCAAG
TGGCTGCCGG GTCTGTCGTC CGGAGAGATC CTGCCCACCG CCGTCTTCAC TGAACCCAAC
ACCGGATCAG ACCTCGGCTC CCTGCGCACG AAAGCCACCA AAGACGGCGA TGATTGGGTC
ATCAATGGCA ATAAAACCTG GATCACCCAT GCCGCGCGAA CCCATGTGAT GACCGTGCTG
GCACGAACCA TCCCCGACAC GAACGATTAC AAGGGCCTGT CGATGTTTCT GGCCGAAAAG
ACCCCCGGCA CCGACGAGGC ACCCTGGCAG GACGCTGGCA TCTCGGGCGG TGAGATCGAG
GTTCTGGGTT ACCGCGGCAT GAAGGAATAC ACCGTCAACT TTGACGATTT CAAAGTGAAG
GGTGAAAACC TTTTGGGCGG TCAGGAAGGC CAGGGCTTCA AGCAGCTCAT GCAAACGTTT
GAGAGCGCGC GCATCCAAAC CGCCGCCCGC GCCATCGGTG TCGCCCAATC CGCCCTTGAT
GCCGGGATGC AGTATGCGCA GGACCGCAAG CAATTCGGCA AAGGCCTGAT CAACTTCCCC
CGCGTCTCCG GCAAGCTGGC GATGATGGCC GTGGAGATCA TGGTCGCCCG GCAACTGACG
TATTTCTCGG CACGCGAGAA GGACAATGAC CGCCGCTGTG ACCTGGAAGC TGGCATGGCG
AAACTTCTGG GGGCTCGTGT CGCCTGGGCT GCTGCCGATA ACGCCCTGCA AATCCACGGC
GGCAACGGCT TCGCACTGGA ATATGGTATT AGCCGCATCC TATGCGATGC GCGGATCCTG
AACATCTTTG AGGGCGCCGC TGAAATTCAG GCGCAGGTCA TCGCCCGGCG ATTGTTGGCA
TAG
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| Protein sequence | MPRDAQQQPE TAVILSDLLA LTSSAVAPAE ALLNKAKSHL RYVLSEGGRI SAPLIERNQT
AAHGLAWLAT YVESLRQMQG WAERLDADGK FGEIEQLILQ ITFGEYLWQI YGGIPMSQGE
ILRLQDIGLS QDDQRALMDD AVMTLTASGN TQAARTRLVE LMQDRAAEVT VGACGLDEEL
DMIREQFRRY AVDRVIPNAH DWHLNDELIP MDIIEDLSEM GVFGLTIPEE HGGLGMSKAS
MCVVSEELSR GYIGVGSLAT RSEIAAELIL AGGTDDQKAK WLPGLSSGEI LPTAVFTEPN
TGSDLGSLRT KATKDGDDWV INGNKTWITH AARTHVMTVL ARTIPDTNDY KGLSMFLAEK
TPGTDEAPWQ DAGISGGEIE VLGYRGMKEY TVNFDDFKVK GENLLGGQEG QGFKQLMQTF
ESARIQTAAR AIGVAQSALD AGMQYAQDRK QFGKGLINFP RVSGKLAMMA VEIMVARQLT
YFSAREKDND RRCDLEAGMA KLLGARVAWA AADNALQIHG GNGFALEYGI SRILCDARIL
NIFEGAAEIQ AQVIARRLLA
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