| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0204 |
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| Symbol | mmgC |
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| ID | 5712129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 201901 |
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| End bp | 203595 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266099 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_001531554 |
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| Protein GI | 159042760 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0731517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.952971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCATG ATGGACAGGA TCTTTCCCTG AACGATGCCC AGACCGTGGT TCTGCCGGAC
CTGCTGAACC TGACCGCGGC TGCCGTGCCC CCGGTCGAGG CGGTGCTCGA AAAGGCCGTC
GCGATCCTGA AGACGCAACT GGCCGTGGAC GGACGCATCT CCGGGGCCCT GGTCGAAGAG
CACCAGACCG CCTCCCACGG GCTGGCTTGG CTGGCGACCT ATGCCCAATC CCTGCGCCAG
ATGCAGAAGT GGGCCGAAAC CCTGCAAGCC GACGGCAAGT TCGGCGAGGT GGAGCAGCTG
ATCCACCAGA TCGCCTTCGG CGAATACCTC TGGCAGCTCT ATGGCGGCAT TCCGATGTCC
CAGGGCGAAA TCCTGCGCCT TCAGGATATC GGGCTGAGCC AGGACGACCA GCGCGGCCTG
ATGACCCCCG AGATCCAGAC CCTGACGCGG TCCGGCAACA CCCAGGCCGC CCGCACCCGC
CTGGTCGAGC TGATGCAGGA ACGCGCGGCG GAAATCACCG TCGGCGCCAC CGGCCTCGAT
GACGAGCTGG AGATGATCCG CGAGCAGTTC CGCCGCTTCT CCGTCGACAA GGTCGAGCCA
CACGCCCATG AATGGCACCT CAAGGACGAG CTGATCCCGA TGGAGATCAT CGAGGAGCTT
GCCGAGATGG GCGTGTTCGG GCTGACCATC CCCGAGGAAT ATGGCGGTTT CGGCCTGTCC
AAGGCCTCGA TGTGCGTCGT CTCGGAAGAG CTGTCGCGCG GCTATATCGG CGTCGGCTCC
CTCGGCACCC GGTCCGAGAT CGCCGCTGAG CTGATCATCT GCGGCGGCAC CGAAGAGCAG
AAGCAGAAAT GGCTCCCGCG CCTGGCCTCC GCCGAAACCC TGCCCACCGC CGTCTTCACC
GAGCCCAACA CCGGCTCGGA CCTCGGTGCG TTGCGCACCC GCGCGGTGCA GGACGAGAAT
GGCGACTGGA AGGTGACCGG CAACAAGACC TGGATCACCC ACGCCGCCCG CACCCATGTG
ATGACCCTGC TCGCGCGCAC CAAGCCGGAC ACGACCGACC ATCGCGGCCT GTCGATGTTC
CTGGCCGAAA AGACCCCGGG CACCGACGAG GCCCCCTTCC CGACCGAAGG CATGACCGGC
GGCGAGATCG AGGTGCTCGG CTATCGCGGC ATGAAGGAAT ACGAGCTGGC CTTCGACAAC
TTCCACGTCA AGGGCGAGAA CCTGCTGGGC GGCGAAGAAG GCAAGGGCTT CAAGCAGCTC
ATGGAAACGT TTGAGTCCGC CCGCATCCAG ACCGCCGCCC GCGCCATCGG CGTTGCGCAA
TCCGCGCTCG ATGTGTCCAT GCAGTATGCG ATCGACCGCA AGCAGTTCGG CAAGTCGCTC
ATCAACTTCC CCCGCGTCTC GGGCAAGCTG GCGATGATGG CGGTCGAAAT CATGGTCGCG
CGGCAGCTGA CCTATTTCTC GGCCTTCGAG AAGGACGAGG GCCGCCGCTG CGATGTGGAG
GCCGGCATGG CCAAGCTGCT CGGTGCCCGC GTGGCCTGGG CCGCCGCCGA TAACGGGCTG
CAGATCCACG GCGGCAACGG CTTTGCCCTG GAATACGGCA TCAGCCGCAT CCTGTGCGAC
GCGCGGATCC TCAACATCTT CGAGGGCGCC GCCGAGATCC AGGCCCAGGT CATCGCCCGC
CGCCTGCTCG GCTGA
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| Protein sequence | MPHDGQDLSL NDAQTVVLPD LLNLTAAAVP PVEAVLEKAV AILKTQLAVD GRISGALVEE
HQTASHGLAW LATYAQSLRQ MQKWAETLQA DGKFGEVEQL IHQIAFGEYL WQLYGGIPMS
QGEILRLQDI GLSQDDQRGL MTPEIQTLTR SGNTQAARTR LVELMQERAA EITVGATGLD
DELEMIREQF RRFSVDKVEP HAHEWHLKDE LIPMEIIEEL AEMGVFGLTI PEEYGGFGLS
KASMCVVSEE LSRGYIGVGS LGTRSEIAAE LIICGGTEEQ KQKWLPRLAS AETLPTAVFT
EPNTGSDLGA LRTRAVQDEN GDWKVTGNKT WITHAARTHV MTLLARTKPD TTDHRGLSMF
LAEKTPGTDE APFPTEGMTG GEIEVLGYRG MKEYELAFDN FHVKGENLLG GEEGKGFKQL
METFESARIQ TAARAIGVAQ SALDVSMQYA IDRKQFGKSL INFPRVSGKL AMMAVEIMVA
RQLTYFSAFE KDEGRRCDVE AGMAKLLGAR VAWAAADNGL QIHGGNGFAL EYGISRILCD
ARILNIFEGA AEIQAQVIAR RLLG
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