Gene PA14_43420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_43420 
Symbol 
ID4381648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3867742 
End bp3868896 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content67% 
IMG OID639326055 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_791620 
Protein GI116049576 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0779209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGTG ATCCGGAAAC CCTGAACCTG CTGCTGGACA GCATCCGCCA GTTCGTCCGC 
GAAAGCCTGG TGCCTCATGA GCAGGAGGTG GCGGAAACCG ACCGCATCCC CGAGGCGATC
ATCGCCCGCA TGCGCGAGAT GGGCCTGTTC GGCCTGTCGA TCCCGGAGGC CTACGGCGGC
CTCGGGGTGA CCATGGAGGA AGAGGTGAGC ATCGCCTTCG AACTGGGGCG GACCTCGCCG
GCGTTCCGTT CGCTGCTGGG CACCAACAAT GGCATCGGCT CCCAGGGCAT CGTCATCGAC
GGCACCGAAG AACAGAAGCG GCGCTACCTG CCGCGCCTGG CGTCGGGCGA ACTGCTCAGT
TCGTTCTGCC TCACCGAACC GGACTCCGGT TCCGACGCCG CCTCGCTGAA GACCACGGCG
GTGCGTGACG GCCAGCACTA CGTGCTCAAC GGTACCAAGC GCTTCATCAC CAACGCCCCG
CAGGCCGGCA TCTACACCGT GATGGCACGC ACCGACCCGG CGATCCGTGG CGCCGGCGGA
ATCTCCGCTT TCGTCGTCGA GCGCGGTACG CCCGGGCTGT CCCTGGGCAA GCCGGATCGC
AAGATGGGAC AGAAGGGCGC GCATACCTGT GACGTGATCT TCGACGACTG CCGGGTGCCT
GCCAGCCAGT TGATCGGCGG GGTCGAGGGC GTCGGCTTCA AGACCGCGAT GAAGGTGCTC
GACAAGGGCC GCCTGCACAT CGCCGCGGTC TGCGTGGGGG TCGCCGAGCG GATGCTCGAG
GATGCGTTGC GCTATGCTCT GGAACGCAAG CAGTTCGGCC AGCCGATCGC CGAGTTCCAG
TTGATCCAGG CAATGCTCGC CGACAGCAAG GCCGAGGCCT ACGCGGCGCG CTGCATGGTC
ATCGACGCCG CGCGGCAGCG CGACGAAGGC CGCGATGTCG GTACCGAGGC GTCCTGCGCC
AAGCTGTTCG CCTCGGAAAT GTGCGGCCGC GTCGCCGACC GCGCGGTGCA GATCTTCGGC
GGCGCCGGCT ATATCGGCGA CTATGGGATC GAGCGCTTCT ATCGCGACGT GCGACTGTTC
CGCATCTACG AGGGCACCAC GCAGATCCAG CAACTACTGA TCGCCCGCAA CATGATCCGC
GCCGCCCAGG GCTAG
 
Protein sequence
MIRDPETLNL LLDSIRQFVR ESLVPHEQEV AETDRIPEAI IARMREMGLF GLSIPEAYGG 
LGVTMEEEVS IAFELGRTSP AFRSLLGTNN GIGSQGIVID GTEEQKRRYL PRLASGELLS
SFCLTEPDSG SDAASLKTTA VRDGQHYVLN GTKRFITNAP QAGIYTVMAR TDPAIRGAGG
ISAFVVERGT PGLSLGKPDR KMGQKGAHTC DVIFDDCRVP ASQLIGGVEG VGFKTAMKVL
DKGRLHIAAV CVGVAERMLE DALRYALERK QFGQPIAEFQ LIQAMLADSK AEAYAARCMV
IDAARQRDEG RDVGTEASCA KLFASEMCGR VADRAVQIFG GAGYIGDYGI ERFYRDVRLF
RIYEGTTQIQ QLLIARNMIR AAQG