| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2444 |
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| Symbol | |
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| ID | 4076926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2584992 |
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| End bp | 2586695 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007768 |
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| Product | isovaleryl-CoA dehydrogenase |
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| Protein accession | YP_614438 |
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| Protein GI | 99082284 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.590306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.477736 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATGC CCCATGACGG ACAATTGGAC GGACAGGATA TGAAACCCAA CACCCCTCTG
CTGCCGGAGC TTCTGGCATT GACCAAGGAG GCGCTGCCGC CTCTGGACGA GCTGCTGGAG
CGCGCGACCG CACGGGTGCG TGACAACGTC AGCAACAACG GCAGGGTTTC CGGGGCGCTG
GTAGAGCAGC ACCAATATGC CGCCCATGGG CTCGCATGGC TAGCCACCTA CGTCTATTCC
CTGCGCCAGA TGCATCGCTG GGCAGAGGCG CTTGAGCGGG ACGCAAAGTT TGGCGAGATG
GAGCAGTTGA TCCACCAGAT CGCCTTTGGA GAATATCTCT GGCAGATCTA TGGCGGGATC
CAGATGAACC AGGGCGAAGT GCTGCGCCTT CAGGATCTGG GGCTGTCGCA AGACGATCAG
CGCGCGCTGA TGGCACCCGC CGTCATGATG CTTACGCAGT CGGGAAACAC GCAGGCCGCG
CGGGTCCGTC TTGTGGAATT GATGGAGCAG CAGGCGGGGA GCACGATGTT CGGGGCCTCC
GGGCTCGACG AAGAGCTGGA GATGATCCGT GATCAATTCC GCCGCTACGC GCAGGAAAAG
GTCGAACCCT TTGCGCACGA CTGGCACCTG AAGGACGAGT TGATCCCTCT CGACGTGATT
GAAGAGCTGG CGGAAATGGG GGTCTTTGGT CTGACTATCC CAGAGGAGTT TGGCGGCTTC
GGGCTCTCCA AAGCGTCGAT GTGTGTGGTC TCTGAGGAGC TGTCGCGCGG TTACATCGGT
GTCGGCTCTC TAGGCACCCG CTCCGAAATT GCCGCCGAGC TGATCCTTGC CGGGGGCACC
GACGCGCAGA AACAGCAATG GCTGCCCAAG ATCGCGAGCG CCGAGATTCT TCCCACGGCA
GTCTTTACCG AGCCCAATAC CGGATCTGAT CTCGGCAGCC TGCGCACCCG CGCGGTGAAG
GACGCGGCGG GTGACTATCA GATCACCGGC AACAAGACCT GGATCACCCA TGCTGCCCGT
ACCCATGTGA TGACGCTTCT CGCGCGCACG GACCCCGAGA CTACGGACCA TCGCGGTCTC
AGCATGTTCC TTGCGGAAAA AACGCCGGGG ACGGATGAAA CCCCCTTCCC GACCGAAGGG
ATGACGGGGG GCGAAATCGA GGTCCTCGGC TATCGCGGTA TGAAAGAATA CGAACTTGGG
TTCGATGGCT TTCATGTGAA GGGCGAGAAT CTCCTCGGTG GCGAAGAGGG CAAAGGTTTC
AAGCAGTTGA TGGAAACCTT TGAATCGGCC CGGATCCAGA CCGCGGCCCG GGCGATTGGC
GTAGCACAAT CGGCGCTCGA TATTGCGATG CAATATGCAC AGGATCGCAA ACAGTTCGGC
AAGGCGTTGA TCAATTTCCC GCGCGTGTCT TCCAAGCTTG CGATGATGGC GGTCGAGGTC
ATGGTGGCGC GGCAGCTGAC GTATTTCTCG GCTTGGGAGA AAGACAACGG CCACCGCTGC
GATCTTGAGG CAGGAATGGC CAAGCTCCTC GGCGCGCGTG TGGCCTGGGC GGCGGCGGAC
AACGGCTTGC AGATCCATGG CGGCAACGGG TTCGCGCTGG AGTATAAGAT CTCTCGCGTT
CTCTGCGATG CGCGGATCCT CAATATTTTT GAGGGCGCAG CTGAGATCCA GGCACAGGTG
ATCGCGCGGC GTCTTCTGGC GTAA
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| Protein sequence | MRMPHDGQLD GQDMKPNTPL LPELLALTKE ALPPLDELLE RATARVRDNV SNNGRVSGAL
VEQHQYAAHG LAWLATYVYS LRQMHRWAEA LERDAKFGEM EQLIHQIAFG EYLWQIYGGI
QMNQGEVLRL QDLGLSQDDQ RALMAPAVMM LTQSGNTQAA RVRLVELMEQ QAGSTMFGAS
GLDEELEMIR DQFRRYAQEK VEPFAHDWHL KDELIPLDVI EELAEMGVFG LTIPEEFGGF
GLSKASMCVV SEELSRGYIG VGSLGTRSEI AAELILAGGT DAQKQQWLPK IASAEILPTA
VFTEPNTGSD LGSLRTRAVK DAAGDYQITG NKTWITHAAR THVMTLLART DPETTDHRGL
SMFLAEKTPG TDETPFPTEG MTGGEIEVLG YRGMKEYELG FDGFHVKGEN LLGGEEGKGF
KQLMETFESA RIQTAARAIG VAQSALDIAM QYAQDRKQFG KALINFPRVS SKLAMMAVEV
MVARQLTYFS AWEKDNGHRC DLEAGMAKLL GARVAWAAAD NGLQIHGGNG FALEYKISRV
LCDARILNIF EGAAEIQAQV IARRLLA
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