More than 300 homologs were found in PanDaTox collection
for query gene Paes_1214 on replicon NC_011059
Organism: Prosthecochloris aestuarii DSM 271



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011059  Paes_1214  response regulator receiver protein  100 
 
 
125 aa  249  7e-66  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.678516  hitchhiker  0.000513941 
 
 
-
 
NC_007512  Plut_0891  response regulator receiver domain-containing protein  50.41 
 
 
137 aa  113  1.0000000000000001e-24  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_2765  response regulator receiver protein  43.7 
 
 
119 aa  99.4  1e-20  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.557597  n/a   
 
 
-
 
NC_010571  Oter_4110  response regulator receiver protein  40 
 
 
126 aa  99.8  1e-20  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0532  putative response regulator receiver (CheY-like protein)  40 
 
 
144 aa  90.1  9e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.693911  normal  0.53556 
 
 
-
 
NC_008639  Cpha266_1786  response regulator receiver protein  43.36 
 
 
120 aa  88.2  4e-17  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3210  response regulator receiver protein  39.34 
 
 
124 aa  87.4  6e-17  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0418  response regulator receiver protein  38.84 
 
 
123 aa  86.3  1e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.22885  n/a   
 
 
-
 
NC_007512  Plut_2012  response regulator receiver domain-containing protein  40.71 
 
 
122 aa  85.9  2e-16  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.631712 
 
 
-
 
NC_002939  GSU1291  response regulator  39.34 
 
 
123 aa  82.4  0.000000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2047  response regulator receiver protein  39.34 
 
 
157 aa  79.3  0.00000000000002  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.0637102 
 
 
-
 
NC_008576  Mmc1_2817  response regulator receiver protein  39.34 
 
 
157 aa  79.3  0.00000000000002  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1827  response regulator receiver protein  36.89 
 
 
130 aa  76.6  0.00000000000009  Geobacter lovleyi SZ  Bacteria  normal  0.32093  n/a   
 
 
-
 
NC_007643  Rru_A2758  response regulator receiver domain-containing protein  37.7 
 
 
122 aa  76.3  0.0000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_1287  response regulator receiver domain-containing protein  35.54 
 
 
127 aa  76.6  0.0000000000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.442215  n/a   
 
 
-
 
NC_013517  Sterm_2773  response regulator receiver protein  38.02 
 
 
120 aa  76.3  0.0000000000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2408  PAS/PAC sensor hybrid histidine kinase  35.77 
 
 
647 aa  75.5  0.0000000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  0.385618  n/a   
 
 
-
 
NC_004311  BRA0043  response regulator  35.77 
 
 
120 aa  75.5  0.0000000000002  Brucella suis 1330  Bacteria  normal  0.868286  n/a   
 
 
-
 
NC_009668  Oant_4284  response regulator receiver protein  35.77 
 
 
130 aa  75.5  0.0000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0040  response regulator  35.77 
 
 
120 aa  75.5  0.0000000000002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0719  response regulator receiver modulated diguanylate cyclase  35.83 
 
 
307 aa  75.5  0.0000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2816  response regulator receiver protein  33.88 
 
 
120 aa  74.3  0.0000000000005  Xanthobacter autotrophicus Py2  Bacteria  normal  0.101903  normal  0.104606 
 
 
-
 
NC_009675  Anae109_4152  two component, sigma54 specific, Fis family transcriptional regulator  32.52 
 
 
480 aa  72.8  0.000000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.038607 
 
 
-
 
NC_007974  Rmet_3680  response regulator receiver domain-containing protein  36 
 
 
127 aa  73.2  0.000000000001  Cupriavidus metallidurans CH34  Bacteria  normal  0.383377  normal  0.047176 
 
 
-
 
NC_009831  Ssed_0601  response regulator receiver protein  34.43 
 
 
265 aa  72.4  0.000000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_0931  response regulator receiver protein  30.83 
 
 
430 aa  72.4  0.000000000002  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0717  two component, sigma54 specific, Fis family transcriptional regulator  32.77 
 
 
466 aa  72  0.000000000003  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1335  response regulator receiver protein  34.15 
 
 
125 aa  72  0.000000000003  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.51819  normal  0.0884587 
 
 
-
 
NC_010511  M446_5217  response regulator receiver protein  33.88 
 
 
118 aa  72  0.000000000003  Methylobacterium sp. 4-46  Bacteria  normal  0.0686971  normal  0.0287673 
 
 
-
 
NC_009719  Plav_1998  response regulator receiver protein  33.06 
 
 
120 aa  72  0.000000000003  Parvibaculum lavamentivorans DS-1  Bacteria  hitchhiker  0.00000230643  normal 
 
 
-
 
NC_011894  Mnod_5952  response regulator receiver protein  33.88 
 
 
118 aa  72  0.000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0493294  n/a   
 
 
-
 
NC_007760  Adeh_0417  two component, sigma54 specific, Fis family transcriptional regulator  31.93 
 
 
474 aa  71.2  0.000000000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.45134  n/a   
 
 
-
 
NC_012918  GM21_2694  two component, sigma54 specific, transcriptional regulator, Fis family  30.71 
 
 
461 aa  71.2  0.000000000004  Geobacter sp. M21  Bacteria  n/a    hitchhiker  7.62039e-17 
 
 
-
 
NC_008254  Meso_2750  response regulator receiver protein  35.77 
 
 
120 aa  71.6  0.000000000004  Chelativorans sp. BNC1  Bacteria  hitchhiker  0.000684047  n/a   
 
 
-
 
NC_009511  Swit_0135  response regulator receiver protein  31.4 
 
 
124 aa  71.2  0.000000000004  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_002620  TC0753  sigma-54 dependent response regulator  35.34 
 
 
387 aa  70.9  0.000000000006  Chlamydia muridarum Nigg  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0043  response regulator receiver protein  33.88 
 
 
118 aa  70.9  0.000000000006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0842812  normal 
 
 
-
 
NC_010172  Mext_3276  response regulator receiver  33.88 
 
 
118 aa  70.9  0.000000000006  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3600  response regulator receiver protein  33.88 
 
 
118 aa  70.9  0.000000000006  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.11211  normal 
 
 
-
 
NC_007519  Dde_1018  response regulator receiver domain-containing protein  35.04 
 
 
131 aa  70.9  0.000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.100773  n/a   
 
 
-
 
NC_010725  Mpop_3474  response regulator receiver protein  33.88 
 
 
118 aa  70.9  0.000000000006  Methylobacterium populi BJ001  Bacteria  normal  normal  0.790484 
 
 
-
 
NC_011145  AnaeK_0445  two component, sigma54 specific, transcriptional regulator, Fis family  31.93 
 
 
481 aa  70.9  0.000000000006  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3439  two component transcriptional regulator  30.89 
 
 
239 aa  70.9  0.000000000006  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2532  GAF sensor hybrid histidine kinase  35.54 
 
 
794 aa  70.1  0.000000000009  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.108241  normal 
 
 
-
 
NC_011891  A2cp1_0446  two component, sigma54 specific, transcriptional regulator, Fis family  31.93 
 
 
481 aa  69.7  0.00000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2841  response regulator receiver protein  36.61 
 
 
145 aa  69.7  0.00000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010814  Glov_1694  two component, sigma54 specific, transcriptional regulator, Fis family  36.97 
 
 
472 aa  69.7  0.00000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_4279  response regulator receiver protein  34.45 
 
 
232 aa  69.3  0.00000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.254527  normal 
 
 
-
 
NC_011146  Gbem_1522  two component, sigma54 specific, transcriptional regulator, Fis family  31.5 
 
 
461 aa  69.7  0.00000000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0198  two component, sigma54 specific, transcriptional regulator, Fis family  34.43 
 
 
461 aa  69.7  0.00000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008783  BARBAKC583_0612  response regulator  32.23 
 
 
120 aa  69.7  0.00000000001  Bartonella bacilliformis KC583  Bacteria  normal  0.124392  n/a   
 
 
-
 
NC_009012  Cthe_1805  response regulator receiver modulated diguanylate cyclase  34.96 
 
 
310 aa  69.3  0.00000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0638722  n/a   
 
 
-
 
NC_009943  Dole_2401  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
449 aa  70.1  0.00000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6441  response regulator receiver modulated metal dependent phosphohydrolase  29.66 
 
 
470 aa  68.9  0.00000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2368  putative signal transduction protein  31.67 
 
 
403 aa  68.9  0.00000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.374822  n/a   
 
 
-
 
NC_010581  Bind_3644  response regulator receiver protein  33.06 
 
 
127 aa  68.9  0.00000000002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  hitchhiker  0.00272169  normal  0.799381 
 
 
-
 
NC_007404  Tbd_0085  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  35.29 
 
 
738 aa  69.3  0.00000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.127866 
 
 
-
 
NC_007413  Ava_3628  two component LuxR family transcriptional regulator  35.25 
 
 
225 aa  68.6  0.00000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.717242  normal  0.142765 
 
 
-
 
NC_009523  RoseRS_3770  response regulator receiver protein  33.61 
 
 
391 aa  68.6  0.00000000002  Roseiflexus sp. RS-1  Bacteria  normal  unclonable  0.0000112062 
 
 
-
 
NC_009972  Haur_3458  multi-sensor signal transduction histidine kinase  35.85 
 
 
958 aa  68.9  0.00000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_1345  response regulator receiver  37.19 
 
 
227 aa  68.6  0.00000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.71904 
 
 
-
 
NC_009483  Gura_1428  two component, sigma-54 specific, Fis family transcriptional regulator  33.07 
 
 
460 aa  68.9  0.00000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  32.74 
 
 
473 aa  68.9  0.00000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_007760  Adeh_0833  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
466 aa  68.9  0.00000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.96038  n/a   
 
 
-
 
NC_008321  Shewmr4_0549  response regulator receiver protein  32.52 
 
 
265 aa  69.3  0.00000000002  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3481  response regulator receiver protein  32.52 
 
 
265 aa  69.3  0.00000000002  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  34.71 
 
 
513 aa  68.6  0.00000000002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_008554  Sfum_0621  two component, sigma54 specific, Fis family transcriptional regulator  30.25 
 
 
472 aa  68.9  0.00000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0776  response regulator receiver protein  34.71 
 
 
127 aa  68.9  0.00000000002  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00000835167  normal  0.370558 
 
 
-
 
NC_009483  Gura_3647  two component, sigma-54 specific, Fis family transcriptional regulator  36.59 
 
 
471 aa  69.3  0.00000000002  Geobacter uraniireducens Rf4  Bacteria  normal  0.0209004  n/a   
 
 
-
 
NC_010814  Glov_1166  two component, sigma54 specific, transcriptional regulator, Fis family  35.59 
 
 
447 aa  69.3  0.00000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3157  response regulator receiver protein  32.52 
 
 
266 aa  68.9  0.00000000002  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1234  response regulator receiver protein  33.06 
 
 
138 aa  69.3  0.00000000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0344647 
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  32.74 
 
 
473 aa  68.9  0.00000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
NC_014248  Aazo_2887  LuxR family two component transcriptional regulator  35.25 
 
 
225 aa  68.6  0.00000000003  'Nostoc azollae' 0708  Bacteria  normal  0.526109  n/a   
 
 
-
 
NC_007643  Rru_A2234  response regulator receiver domain-containing protein  30 
 
 
130 aa  68.2  0.00000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0199  two component, sigma54 specific, transcriptional regulator, Fis family  34.17 
 
 
451 aa  68.6  0.00000000003  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.940712  n/a   
 
 
-
 
NC_011729  PCC7424_2881  two component transcriptional regulator, LuxR family  36.59 
 
 
212 aa  68.6  0.00000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007925  RPC_3131  response regulator receiver domain-containing protein  34.4 
 
 
138 aa  68.6  0.00000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.164774  normal 
 
 
-
 
NC_011989  Avi_3746  chemotaxis response regulator  33.06 
 
 
121 aa  68.6  0.00000000003  Agrobacterium vitis S4  Bacteria  normal  0.193057  n/a   
 
 
-
 
NC_009832  Spro_3651  two component, sigma54 specific, Fis family transcriptional regulator  32.2 
 
 
445 aa  68.6  0.00000000003  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2223  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  32.2 
 
 
725 aa  68.6  0.00000000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.847933  n/a   
 
 
-
 
NC_008751  Dvul_2171  response regulator receiver protein  35.4 
 
 
134 aa  68.6  0.00000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3671  multi-sensor hybrid histidine kinase  32.52 
 
 
1034 aa  68.2  0.00000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3324  response regulator receiver protein  34.43 
 
 
265 aa  68.2  0.00000000004  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  32.74 
 
 
473 aa  68.2  0.00000000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4515  response regulator receiver domain-containing protein  32.79 
 
 
119 aa  68.2  0.00000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.403365  normal  0.643653 
 
 
-
 
NC_007958  RPD_4356  response regulator receiver  32.79 
 
 
119 aa  68.2  0.00000000004  Rhodopseudomonas palustris BisB5  Bacteria  hitchhiker  0.00220083  normal 
 
 
-
 
NC_008062  Bcen_5575  response regulator receiver modulated metal dependent phosphohydrolase  28.81 
 
 
472 aa  68.2  0.00000000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_5939  response regulator receiver modulated metal dependent phosphohydrolase  28.81 
 
 
472 aa  68.2  0.00000000004  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.862183 
 
 
-
 
NC_008554  Sfum_2092  two component, sigma54 specific, Fis family transcriptional regulator  36.13 
 
 
462 aa  68.2  0.00000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.131918 
 
 
-
 
NC_014230  CA2559_08281  two component, sigma54 specific, transcriptional regulator, Fis family protein  39.17 
 
 
388 aa  68.2  0.00000000004  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0976  response regulator receiver protein  32.79 
 
 
119 aa  68.2  0.00000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.351318  n/a   
 
 
-
 
NC_007406  Nwi_2946  response regulator receiver  32.79 
 
 
135 aa  67.8  0.00000000005  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2535  response regulator receiver protein  34.96 
 
 
126 aa  67.4  0.00000000005  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0302  two component, sigma54 specific, Fis family transcriptional regulator  34.58 
 
 
465 aa  67.8  0.00000000005  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1760  response regulator receiver modulated diguanylate cyclase  32.23 
 
 
473 aa  67.8  0.00000000005  Geobacter lovleyi SZ  Bacteria  normal  0.554911  n/a   
 
 
-
 
NC_011891  A2cp1_0324  two component, sigma54 specific, transcriptional regulator, Fis family  33.93 
 
 
465 aa  67.4  0.00000000006  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.266606  n/a   
 
 
-
 
NC_009636  Smed_2719  response regulator receiver protein  32.23 
 
 
120 aa  67.4  0.00000000006  Sinorhizobium medicae WSM419  Bacteria  normal  0.0959171  normal 
 
 
-
 
NC_007964  Nham_1143  response regulator receiver domain-containing protein  32.79 
 
 
119 aa  67.4  0.00000000006  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
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