Gene Plav_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1998 
Symbol 
ID5455292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2182658 
End bp2183020 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content59% 
IMG OID640877574 
Productresponse regulator receiver protein 
Protein accessionYP_001413269 
Protein GI154252445 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00000230643 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTA TTCTCCTTGC TGAAGATGAT GAATCCATGC GCCGTTTTCT GTCCAAGGCG 
CTGGAAAACG CCGGCCATGA GGTCGTTTCC TTCGGCAAGG GCGATGAGGC CCATGGCCGT
CTGAAACAGG ATATTTTCGA CATTCTGCTC ACAGATATCG TCATGCCGGA GATGGATGGC
ATCGAATTGG CCCGGCTGGC GGCCGAACTC GACCCTACCC TCAAGATCAT GTTCATCACG
GGTTTTGCGG CGGTGGCGCT AAACCCGGAA GTGGCGGCGC CCCGCGATGC GAAGGTGCTG
TCGAAGCCTT TCCACCTGCG CGATCTGGTG GCCGAGGTCG ACCGGCTGAT GGCGGCTGCC
TGA
 
Protein sequence
MARILLAEDD ESMRRFLSKA LENAGHEVVS FGKGDEAHGR LKQDIFDILL TDIVMPEMDG 
IELARLAAEL DPTLKIMFIT GFAAVALNPE VAAPRDAKVL SKPFHLRDLV AEVDRLMAAA