More than 300 homologs were found in PanDaTox collection
for query gene BBta_0532 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_0532  putative response regulator receiver (CheY-like protein)  100 
 
 
144 aa  291  2e-78  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.693911  normal  0.53556 
 
 
-
 
NC_007925  RPC_3131  response regulator receiver domain-containing protein  38.06 
 
 
138 aa  104  5e-22  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.164774  normal 
 
 
-
 
NC_007760  Adeh_0417  two component, sigma54 specific, Fis family transcriptional regulator  39.52 
 
 
474 aa  92  2e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.45134  n/a   
 
 
-
 
NC_009485  BBta_3940  putative two-component response regulatory protein, response regulator receiver  38.89 
 
 
155 aa  92  3e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.238381  normal  0.445341 
 
 
-
 
NC_011145  AnaeK_0445  two component, sigma54 specific, transcriptional regulator, Fis family  38.71 
 
 
481 aa  90.5  7e-18  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_1214  response regulator receiver protein  40 
 
 
125 aa  90.1  9e-18  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.678516  hitchhiker  0.000513941 
 
 
-
 
NC_008554  Sfum_0643  two component, sigma54 specific, Fis family transcriptional regulator  34.03 
 
 
478 aa  89.7  1e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_0446  two component, sigma54 specific, transcriptional regulator, Fis family  37.9 
 
 
481 aa  89  2e-17  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_4152  two component, sigma54 specific, Fis family transcriptional regulator  38.71 
 
 
480 aa  87.8  4e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.038607 
 
 
-
 
NC_011769  DvMF_1993  two component, sigma54 specific, transcriptional regulator, Fis family  38.58 
 
 
486 aa  86.7  1e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_0749  response regulator receiver protein  37.01 
 
 
406 aa  85.5  2e-16  Cyanothece sp. PCC 7425  Bacteria  normal  0.893418  normal  0.0890519 
 
 
-
 
NC_009943  Dole_1364  two component, sigma54 specific, Fis family transcriptional regulator  33.78 
 
 
485 aa  85.1  3e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0904  two component transcriptional regulator, winged helix family  35.46 
 
 
254 aa  82.8  0.000000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.936287  normal  0.32173 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  36.51 
 
 
461 aa  83.6  0.000000000000001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_013385  Adeg_1897  two component transcriptional regulator, winged helix family  36.3 
 
 
229 aa  82.8  0.000000000000001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0811  Hpt sensor hybrid histidine kinase  36.99 
 
 
724 aa  82.8  0.000000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2142  two component transcriptional regulator  36.64 
 
 
240 aa  81.6  0.000000000000003  Chelativorans sp. BNC1  Bacteria  normal  0.46457  n/a   
 
 
-
 
NC_008347  Mmar10_0766  two component transcriptional regulator  36.8 
 
 
233 aa  82  0.000000000000003  Maricaulis maris MCS10  Bacteria  normal  0.528482  normal  0.302775 
 
 
-
 
NC_010814  Glov_1694  two component, sigma54 specific, transcriptional regulator, Fis family  31.75 
 
 
472 aa  81.3  0.000000000000005  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0252  response regulator receiver protein  28.23 
 
 
239 aa  80.5  0.000000000000007  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.114255 
 
 
-
 
NC_013132  Cpin_1247  two component transcriptional regulator, winged helix family  34.13 
 
 
235 aa  80.1  0.000000000000008  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.464606  normal 
 
 
-
 
NC_007644  Moth_1478  two component transcriptional regulator  32.31 
 
 
240 aa  80.5  0.000000000000008  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000111909  normal 
 
 
-
 
NC_012854  Rleg_6330  two component transcriptional regulator, winged helix family  37.59 
 
 
234 aa  79.3  0.00000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.000626879  normal 
 
 
-
 
NC_007575  Suden_1759  two component transcriptional regulator  35.71 
 
 
220 aa  79.7  0.00000000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2416  two component transcriptional regulator  37.41 
 
 
255 aa  79.7  0.00000000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0279623 
 
 
-
 
NC_007650  BTH_II0376  DNA-binding response regulator IrlR  32.82 
 
 
230 aa  79.7  0.00000000000001  Burkholderia thailandensis E264  Bacteria  normal  0.083776  n/a   
 
 
-
 
NC_013216  Dtox_1377  two component transcriptional regulator, winged helix family  35.07 
 
 
225 aa  79.3  0.00000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000000301655 
 
 
-
 
NC_008578  Acel_1595  two component transcriptional regulator  35.51 
 
 
227 aa  79.7  0.00000000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.526383  normal  0.570373 
 
 
-
 
NC_009483  Gura_3647  two component, sigma-54 specific, Fis family transcriptional regulator  33.06 
 
 
471 aa  79.7  0.00000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.0209004  n/a   
 
 
-
 
NC_004116  SAG0393  DNA-binding response regulator  34.85 
 
 
228 aa  79.3  0.00000000000002  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.632289  n/a   
 
 
-
 
NC_008751  Dvul_0092  response regulator receiver protein  36.36 
 
 
682 aa  79.3  0.00000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3966  PAS/PAC sensor hybrid histidine kinase  39.68 
 
 
677 aa  79  0.00000000000002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000186378 
 
 
-
 
NC_010002  Daci_2852  osmolarity response regulator  36.96 
 
 
243 aa  78.6  0.00000000000002  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2500  osmolarity response regulator  37.68 
 
 
243 aa  78.6  0.00000000000002  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3153  osmolarity response regulator  37.68 
 
 
243 aa  78.6  0.00000000000002  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2981  two component transcriptional regulator  32.58 
 
 
229 aa  79  0.00000000000002  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.0000000201285  n/a   
 
 
-
 
NC_013216  Dtox_2915  two component transcriptional regulator, winged helix family  34.92 
 
 
225 aa  79.3  0.00000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.892207  normal  0.300351 
 
 
-
 
NC_008751  Dvul_2853  two component, sigma54 specific, Fis family transcriptional regulator  34.65 
 
 
476 aa  79.3  0.00000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1251  multi-sensor hybrid histidine kinase  52.94 
 
 
1101 aa  79  0.00000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.000252838 
 
 
-
 
NC_012560  Avin_46550  response regulator  34.92 
 
 
267 aa  79  0.00000000000002  Azotobacter vinelandii DJ  Bacteria  normal  0.0203573  n/a   
 
 
-
 
NC_010511  M446_1528  adenylate/guanylate cyclase  35.43 
 
 
350 aa  79.3  0.00000000000002  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  33.33 
 
 
470 aa  78.2  0.00000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_008576  Mmc1_3443  response regulator receiver protein  31.75 
 
 
223 aa  78.2  0.00000000000003  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3637  osmolarity response regulator  33.09 
 
 
241 aa  78.6  0.00000000000003  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A1103  DNA-binding response regulator IrlR  32.82 
 
 
230 aa  78.6  0.00000000000003  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0630149  n/a   
 
 
-
 
NC_011368  Rleg2_4585  two component transcriptional regulator, winged helix family  36.09 
 
 
234 aa  78.6  0.00000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.209184  normal 
 
 
-
 
NC_009078  BURPS1106A_A2716  DNA-binding heavy metal response regulator  32.82 
 
 
230 aa  78.6  0.00000000000003  Burkholderia pseudomallei 1106a  Bacteria  normal  0.558922  n/a   
 
 
-
 
NC_013061  Phep_1345  response regulator receiver  36.43 
 
 
227 aa  78.2  0.00000000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.71904 
 
 
-
 
NC_012803  Mlut_14770  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  38.89 
 
 
226 aa  78.6  0.00000000000003  Micrococcus luteus NCTC 2665  Bacteria  normal  0.383411  n/a   
 
 
-
 
NC_009380  Strop_1197  response regulator receiver  35.71 
 
 
230 aa  78.2  0.00000000000003  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_3017  two component transcriptional regulator  35.48 
 
 
225 aa  78.6  0.00000000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2869  transcriptional activator protein IrlR  32.82 
 
 
230 aa  78.6  0.00000000000003  Burkholderia pseudomallei 668  Bacteria  normal  0.354021  n/a   
 
 
-
 
NC_010505  Mrad2831_0215  adenylate/guanylate cyclase  35.43 
 
 
351 aa  78.2  0.00000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.354021  normal 
 
 
-
 
NC_007908  Rfer_2732  osmolarity response regulator  34.78 
 
 
243 aa  77.8  0.00000000000004  Rhodoferax ferrireducens T118  Bacteria  normal  0.744063  n/a   
 
 
-
 
NC_007947  Mfla_1307  two component transcriptional regulator  36.29 
 
 
223 aa  78.2  0.00000000000004  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.0973239 
 
 
-
 
NC_009674  Bcer98_3233  two component transcriptional regulator  32.33 
 
 
230 aa  77.8  0.00000000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  31.85 
 
 
234 aa  78.2  0.00000000000004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_008261  CPF_2811  DNA-binding response regulator  34.13 
 
 
228 aa  78.2  0.00000000000004  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_0585  DNA-binding response regulator  31.5 
 
 
230 aa  77.8  0.00000000000004  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00125793  n/a   
 
 
-
 
NC_008782  Ajs_1641  two component transcriptional regulator  33.09 
 
 
243 aa  77.8  0.00000000000005  Acidovorax sp. JS42  Bacteria  normal  0.179821  normal  0.0712727 
 
 
-
 
NC_008577  Shewana3_4017  osmolarity response regulator  32.8 
 
 
241 aa  77.8  0.00000000000005  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4633  osmolarity response regulator  32.8 
 
 
241 aa  77.4  0.00000000000005  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_0343  response regulator receiver  34.35 
 
 
232 aa  77.8  0.00000000000005  Thermobifida fusca YX  Bacteria  normal  0.86362  n/a   
 
 
-
 
NC_007512  Plut_0891  response regulator receiver domain-containing protein  34.4 
 
 
137 aa  77.4  0.00000000000005  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_0754  response regulator receiver domain-containing protein  38.58 
 
 
120 aa  77.8  0.00000000000005  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2558  two component transcriptional regulator  35.77 
 
 
239 aa  77.4  0.00000000000005  Xanthobacter autotrophicus Py2  Bacteria  normal  0.403313  normal 
 
 
-
 
NC_008752  Aave_1584  osmolarity response regulator  37.68 
 
 
243 aa  77.8  0.00000000000005  Acidovorax citrulli AAC00-1  Bacteria  normal  0.131787  normal 
 
 
-
 
NC_008312  Tery_3248  response regulator receiver protein  37.98 
 
 
121 aa  77.8  0.00000000000005  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.500247 
 
 
-
 
NC_009714  CHAB381_0978  DNA-binding response regulator  31.34 
 
 
226 aa  77.4  0.00000000000005  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  31.85 
 
 
237 aa  77.4  0.00000000000006  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  34.15 
 
 
470 aa  77.4  0.00000000000006  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_008321  Shewmr4_3811  osmolarity response regulator  32.8 
 
 
241 aa  77.4  0.00000000000006  Shewanella sp. MR-4  Bacteria  normal  normal  0.0373241 
 
 
-
 
NC_008322  Shewmr7_3902  osmolarity response regulator  32.8 
 
 
241 aa  77.4  0.00000000000006  Shewanella sp. MR-7  Bacteria  normal  normal  0.140952 
 
 
-
 
NC_012850  Rleg_3011  two component transcriptional regulator, winged helix family  33.83 
 
 
233 aa  77  0.00000000000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4156  two component transcriptional regulator  28.47 
 
 
232 aa  77  0.00000000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.0000307056  n/a   
 
 
-
 
NC_007298  Daro_1980  osmolarity response regulator  35.43 
 
 
243 aa  77.4  0.00000000000007  Dechloromonas aromatica RCB  Bacteria  normal  0.431202  normal  0.459947 
 
 
-
 
NC_009953  Sare_1090  two component transcriptional regulator  36.84 
 
 
230 aa  77  0.00000000000007  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0839689 
 
 
-
 
NC_010515  Bcenmc03_4106  two component heavy metal response transcriptional regulator  32.81 
 
 
223 aa  77  0.00000000000007  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.971428 
 
 
-
 
NC_011369  Rleg2_2748  two component transcriptional regulator, winged helix family  33.83 
 
 
233 aa  77  0.00000000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0311  two component transcriptional regulator, winged helix family protein  31.11 
 
 
228 aa  77  0.00000000000007  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00012342  n/a   
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  33.07 
 
 
455 aa  77  0.00000000000008  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_002939  GSU2506  sensory box protein/sigma-54 dependent DNA-binding response regulator  32.52 
 
 
564 aa  77  0.00000000000009  Geobacter sulfurreducens PCA  Bacteria  normal  0.92979  n/a   
 
 
-
 
NC_010622  Bphy_2783  two component transcriptional regulator  34.33 
 
 
245 aa  76.6  0.00000000000009  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_1018  response regulator receiver domain-containing protein  36.97 
 
 
131 aa  77  0.00000000000009  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.100773  n/a   
 
 
-
 
NC_007519  Dde_3465  putative PAS/PAC sensor protein  36.51 
 
 
489 aa  76.6  0.00000000000009  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_2121  osmolarity response regulator  34.07 
 
 
248 aa  76.6  0.00000000000009  Psychrobacter sp. PRwf-1  Bacteria  normal  0.201602  normal  0.531848 
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  29.5 
 
 
135 aa  76.6  0.00000000000009  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3391  two component transcriptional regulator  38.24 
 
 
227 aa  76.3  0.0000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.141218  n/a   
 
 
-
 
NC_011772  BCG9842_B0590  DNA-binding response regulator  34.88 
 
 
230 aa  76.3  0.0000000000001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_4662  DNA-binding response regulator  33.59 
 
 
230 aa  76.6  0.0000000000001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4597  osmolarity response regulator  33.33 
 
 
240 aa  76.6  0.0000000000001  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4363  osmolarity response regulator  34.31 
 
 
243 aa  76.3  0.0000000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.127883 
 
 
-
 
NC_007347  Reut_A0573  two component transcriptional regulator  35.48 
 
 
243 aa  76.3  0.0000000000001  Ralstonia eutropha JMP134  Bacteria  normal  0.437899  n/a   
 
 
-
 
NC_011138  MADE_03947  osmolarity response regulator  33.09 
 
 
240 aa  76.6  0.0000000000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_0819  LuxR family two component transcriptional regulator  33.1 
 
 
227 aa  76.6  0.0000000000001  'Nostoc azollae' 0708  Bacteria  normal  0.633548  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  36.29 
 
 
229 aa  76.3  0.0000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_008262  CPR_2497  DNA-binding response regulator  34.13 
 
 
228 aa  76.6  0.0000000000001  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_5186  two component heavy metal response transcriptional regulator  33.33 
 
 
223 aa  76.6  0.0000000000001  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3302  two component transcriptional regulator  38.4 
 
 
230 aa  76.6  0.0000000000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.288231  normal  0.346827 
 
 
-
 
NC_013173  Dbac_1017  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
445 aa  76.3  0.0000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.246569  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>