| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3966 |
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| Symbol | |
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| ID | 8139340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 4549526 |
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| End bp | 4551559 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644871582 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003023740 |
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| Protein GI | 253702551 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.0000000186378 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAAAG CCTCTGACCC GCCCCAACCC GATCCCCAGG ACGCCCAGGA CGCCCTGGCG
ACGCTGCGGC AAAAGCTCGC GGGACTCGGG GAATCCTCGA TGCGCAAGAG CTACTATCCC
GAACTGCAGG AGCGCCTTGA GGAACTGGAG CGGTTCAAGG CCTTGCTGGA TCACAGCAAC
GAAGCCATCA TCCTGATCGA AGTCTCCACC GGGCGCATCG TCGACCTGAA CGACTCGGCC
AGCCGCCAGA CCGGCTGGAG CCACGACGAG CTGCTGCAGC AATCCCTCTT CGACCTCTCC
AACCTTGAGC AAAATCCCGC CGCGCAAGCG CTGATCAGGT CCGCCGACGA CATGGGAGCC
AGCGGGATGC TGGTCGTCAC CGAGCTCCAC CGCAAAAACG GCGGACGCTT CCCCGCCGAA
ATCACTTTGA ACCGGATGCA ATTCCGCGAT AATTCCTACG TGCTGGCGGT CGCCCGCGAC
ATCACACAGA GGAAGGCGAT GGAGGAGGCG CTTAGGGAGA GCGAGGAATT TCTCAAGAAC
ATCGTTGATC ACATCCCTGC GGTGGTTTTC GCCAAGGAGG TGCAGGGGCT GCGCTTCGTC
ACCATCAACA AGGCGTGCCA GGAGGTGTTC GGCCTGAGCC GGGCGGAGGT GCTCGGCCGC
ACCAACTACG ACCTGTTTCC CAAGGAGCAG GCGGACTTCT TCACCAAGGT CGACCGGGAG
ACCCTCGCCA AGGGCGAGCT GGTGGAGGTC CCGGAGGAAA TCATCAGCAC CCCCAGCGGC
GACCGCATAC TGCGGGTCAA GAAGATTCCG CTCTTCGACA ACCAGGGAAA GGAGCGTTTC
CTGTTGGGGA TCGCCGAGGA CATCACCGAA CGGAAGCAAC TGGAAGAAAA GCTGCTGCAA
TCGCAGAAGA TGGAGGCGAT TGGGCAACTG GCCGGCGGGG TGGCGCACGA CTTCAACAAC
ATCCTGATGG TGATTCTCGG CTACGGGAGC ATTCTGCTGA ACGAGGGGGC GCTGCCGGCG
CGGCAAAAGG AGCAGGTGGA GCAGATCATG AACGCGGCGG ACAAGGCGGC GAAGCTCACC
TCGGACCTCC TCGCCTTCAG CCGAAAGCAG GTGATCAAGC CCGCCACCAT GAACCTGAAC
GACATCATCC TGCACGTGGA AAAGTTCCTC TCCCGCATCA TCGGCGAGGA CGTCCAACTG
AAGGCTCGGC TCACCCCGCG CGAACTGCAG GTCGACGTCG ACCGTGGGCA GATAGAGCAG
GTGCTGATCA ACCTCGCCAC CAACGCCCGG GACGCCATGC CCAAGGGGGG GCTGCTCACC
ATCGAGACCT CGTCGCTGCA GATCGACGAC GCCTTCGTCC AGGCCAACGG CATCGGCGCC
CCCGGCCCTT ACGCCGTCAT CTCCATCTCC GACACCGGCG TCGGCATGAA CGAACAGACC
CGCAGGAGGA TCTTCGAGCC GTTCTTCACC ACCAAGGAGA TGGGGAAGGG CACCGGCCTT
GGCATGTCCA TCGTCTACGG CATCATCAAG CAGCACAACG GCTTCGTGAA CGTCTACAGC
GAGCCGAAGA TAGGGACCAC CTTCCGCATC TACCTCCCCT TCAGCGAACA AAGCTCCGAG
GCGGCCCTGG ACCCCCAAGC CCCCGACAGC GCACCGGGGG GGGCGGAGAC CATACTGGTG
GTGGAGGACG AGCCGGATCT GCGCCTTCTC TTGCAGAACA TCCTTTCCGG AGCCGGGTAC
TGCGTCCTCT TGGCAGAAAA CGGGCAGGTG GCGGTCGAGC GGTACGCGGC CGGCGCAGGG
GGGGAGATAG CGCTGGTGCT GATGGACATG ATCATGCCGG GGATGAGCGG CAAGGAAGCC
TGCCGCGCCA TCCGCGCCAT CGACCCTGCG GCCAAGGTGC TTTACACCAG CGGCTACACC
ATGGACATCA TCAAGAGCCG CGATCTGTTG GAGGAAGGGA CCGAACTTCT CATGAAACCG
GTCCGCCCTC TGGAGCTTTT AAAGAAGGTG CGGGAGATGC TGGATAGGTT GTGA
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| Protein sequence | MKKASDPPQP DPQDAQDALA TLRQKLAGLG ESSMRKSYYP ELQERLEELE RFKALLDHSN
EAIILIEVST GRIVDLNDSA SRQTGWSHDE LLQQSLFDLS NLEQNPAAQA LIRSADDMGA
SGMLVVTELH RKNGGRFPAE ITLNRMQFRD NSYVLAVARD ITQRKAMEEA LRESEEFLKN
IVDHIPAVVF AKEVQGLRFV TINKACQEVF GLSRAEVLGR TNYDLFPKEQ ADFFTKVDRE
TLAKGELVEV PEEIISTPSG DRILRVKKIP LFDNQGKERF LLGIAEDITE RKQLEEKLLQ
SQKMEAIGQL AGGVAHDFNN ILMVILGYGS ILLNEGALPA RQKEQVEQIM NAADKAAKLT
SDLLAFSRKQ VIKPATMNLN DIILHVEKFL SRIIGEDVQL KARLTPRELQ VDVDRGQIEQ
VLINLATNAR DAMPKGGLLT IETSSLQIDD AFVQANGIGA PGPYAVISIS DTGVGMNEQT
RRRIFEPFFT TKEMGKGTGL GMSIVYGIIK QHNGFVNVYS EPKIGTTFRI YLPFSEQSSE
AALDPQAPDS APGGAETILV VEDEPDLRLL LQNILSGAGY CVLLAENGQV AVERYAAGAG
GEIALVLMDM IMPGMSGKEA CRAIRAIDPA AKVLYTSGYT MDIIKSRDLL EEGTELLMKP
VRPLELLKKV REMLDRL
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