| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1345 |
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| Symbol | |
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| ID | 8252445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1603525 |
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| End bp | 1604208 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644934999 |
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| Product | response regulator receiver |
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| Protein accession | YP_003091622 |
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| Protein GI | 255531250 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.71904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTAAGA TTGCATTAGC AGAAGATGAC CCTAAAATAG CCGATCTGAT TAAAAGCGGG
CTGGAAGAAC AAGGCTATGA AATAACCAGT ATTGCCGATG GACAGCAGGC ATTGGAAAGT
TTTGGCATAA ACCATTTTGA CCTTGTTATT CTGGATATTA TGATGCCGGG ACTTAATGGA
ATAGAACTTT GCAGGCAACT CCGCAGCAGC CATAAAAACC TGCCCATCCT GATGCTTACC
GCACTGAGTA CGGTAGACGA TAAGGTAATG GGTTTAAAGG CGGGTGCCGA TGATTACCTG
GCCAAGCCTT TCCATTTTAA AGAGCTGCTT GCCAGAATTG AAGCGCTTTT ACGCAGGTAC
AGCACCGGTA CTATCCAAAA GCAACACCAA CATGAACTTA CTTTTGAAAA CATTACTTTA
AATACCTACA GCAAAGAGGT AAAAAGGGCC GGCATCAATA TTGAGCTTAC GGCAAAAGAG
TTTACACTTC TTGAATTATT TTTACGAAAC CCCAACAGGC TCTTGTCCAG ACAGTATATT
GCTGAAAACG CATGGGACAT TAACTTTGAT ACCGGCACCA ATGTGATTGA CGTATATGTA
AATTTTCTGC GCAATAAAAT TGAAAAGGGA TTTGACAGAA AAGTGATCCA CACCAAAATA
AATATGGGTT ATATCCTTAA ATAG
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| Protein sequence | MFKIALAEDD PKIADLIKSG LEEQGYEITS IADGQQALES FGINHFDLVI LDIMMPGLNG
IELCRQLRSS HKNLPILMLT ALSTVDDKVM GLKAGADDYL AKPFHFKELL ARIEALLRRY
STGTIQKQHQ HELTFENITL NTYSKEVKRA GINIELTAKE FTLLELFLRN PNRLLSRQYI
AENAWDINFD TGTNVIDVYV NFLRNKIEKG FDRKVIHTKI NMGYILK
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