| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4017 |
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| Symbol | ompR |
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| ID | 4480231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4826687 |
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| End bp | 4827412 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639728632 |
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| Product | osmolarity response regulator |
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| Protein accession | YP_871640 |
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| Protein GI | 117922448 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGACAAG AAACCTCGAA AATCCTCGTC GTCGATGATG ATATGCGCCT ACGAGCACTA
CTCGAGCGTT ACCTGATGGA GCAAGGCTAT CAGGTGCGCA GTGCGGCCAA TGCTGAGCAG
ATGGACCGTT TATTGGAGCG GGAAAACTTC CACCTGATAG TGCTCGATCT GATGTTGCCC
GGAGAAGATG GCTTATCCAT CTGTCGTCGC CTGCGCCAAC AGGGCAGCAC GATTCCAATT
GTGATGCTCA CCGCCAAGGG CGATGAGGTC GACCGCATTA TCGGCCTAGA ACTCGGCGCC
GATGATTACC TGCCGAAACC CTTTAACCCA AGGGAATTAT TGGCACGGAT CAAAGCGGTA
ATGCGTCGCC AAATCCAAGA TGTACCCGGC GCACCCGCGC AGCAGGAAGC CGAAATTAGC
TTTGGCGAGT TCTCCCTCGA CTTAGCCACC CGTGAGATGT ACCACGGCAA TGAGGCCATC
GCCCTCACCA GTGGTGAGTT TGCGGTATTA AAAGTGTTAG TGACTCATCC ACGCGAGCCT
TTATCGCGGG ATAAATTGAT GAACCTCGCC CGCGGCCGCG ATTATTCGGC GCTAGAGCGC
TCAATTGACG TACAGGTTTC GCGCCTGCGC CGATTGATTG AGAAGGATCC CGCTAATCCG
CGCTACATTC AAACCGTGTG GGGTCTTGGC TATGTGTTTG TACCCGACGG CGCAGCCCGT
CGATGA
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| Protein sequence | MGQETSKILV VDDDMRLRAL LERYLMEQGY QVRSAANAEQ MDRLLERENF HLIVLDLMLP
GEDGLSICRR LRQQGSTIPI VMLTAKGDEV DRIIGLELGA DDYLPKPFNP RELLARIKAV
MRRQIQDVPG APAQQEAEIS FGEFSLDLAT REMYHGNEAI ALTSGEFAVL KVLVTHPREP
LSRDKLMNLA RGRDYSALER SIDVQVSRLR RLIEKDPANP RYIQTVWGLG YVFVPDGAAR
R
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