| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1584 |
|---|
| Symbol | ompR |
|---|
| ID | 4669298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1750185 |
|---|
| End bp | 1750916 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639822786 |
|---|
| Product | osmolarity response regulator |
|---|
| Protein accession | YP_969947 |
|---|
| Protein GI | 120610269 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.131787 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCTA CAACCAACCG TACCGACAAG ATCCTCGTGG TGGACGACGA CGCGCGCATC
CGTGATTTGC TGCGCCGCTA TCTGACCCAG GAAGGCTTCG AAGTCATGGT GGCGGAAGAC
GGCAAGGCGC TCAACCGCAT CCTGCTGCGC GAGACGGTCG AACTGATCGT TCTGGATCTC
ATGATGCCCG GCGAGGACGG GCTCTCCATC TGCCGCCGCC TGCGCGCGGC CAACGACCGC
ACCCCGATCA TCATGCTCAC CGCCAAGGGC GAGGACGTGG ACCGCATCGT CGGCCTGGAG
GTGGGTGCGG ACGACTACCT GGGCAAGCCC TTCAATCCCC GCGAACTGCT GGCGCGCATC
CATGCCGTGC TGCGCCGCCG CCCGCCGCAG GAGGCCCCCG GCGCCCCGTC GGGCGACAAC
GAGGTCGTGA CCTTCGGCCC CTTCACCTTC GACCTGGGCA CCCGCGCCCT GCAGAAGAAC
GGCGAGGAGC TGCCCCTCAC CACCGGCGAA TTCGCCATGC TCAAGGCCCT GGTGCGCCAC
CCGCGCCAGC CGCTGTCGCG CGAAAAACTG GCCCTGCTGG CCCGCGGCCG CGAGTTCGAG
CCCTTCGACC GCAGCCTGGA CGTGCAGGTC TCGCGCCTGC GCAAGCTGGT CGAGGTGGAC
GCCGCCGCCC CCCGCTACAT CCAGACCGTC TGGGGCGTGG GCTACGTGTT CGTGCCGGAT
GGAGCGAGCT GA
|
|---|
| Protein sequence | MASTTNRTDK ILVVDDDARI RDLLRRYLTQ EGFEVMVAED GKALNRILLR ETVELIVLDL
MMPGEDGLSI CRRLRAANDR TPIIMLTAKG EDVDRIVGLE VGADDYLGKP FNPRELLARI
HAVLRRRPPQ EAPGAPSGDN EVVTFGPFTF DLGTRALQKN GEELPLTTGE FAMLKALVRH
PRQPLSREKL ALLARGREFE PFDRSLDVQV SRLRKLVEVD AAAPRYIQTV WGVGYVFVPD
GAS
|
|---|
| |