| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2121 |
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| Symbol | ompR |
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| ID | 5205412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2643843 |
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| End bp | 2644589 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640600363 |
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| Product | osmolarity response regulator |
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| Protein accession | YP_001281011 |
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| Protein GI | 148653918 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.201602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.531848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGACA ATAAAATCAA CAATACCGAC AGTTTAACCC ACCGTATCTT GGTGGTTGAT
GATGATGCCC GTTTACGCTC TTTGCTACAG CGCTTTTTGG AAGATGATGG CTTCGTGGTG
CGTACCGCCC ATGATGGCAG CCAAATGGAT AAACTGATGC AGCGTGAGTT ATTCTCGTTG
GTGGTATTAG ACTTAATGCT ACCCGGTGAA GATGGCATTG CTATCTGTAA GCGCCTGCGT
GAAGAGAACA GTGATATCCC TATTATTATG CTCACTGCAA AAGGCTCAGA CAGTGATCGT
ATTGCTGGCC TTGAGGCGGG TGCTGACGAC TATTTGCCTA AGCCTTTTAA CCCAAAAGAA
TTGCTGGCCC GTATCAAAGC GGTTCTGCGT CGTCACAGCC GTGAGCTGCC TGGCGCGCCT
TCGCAGCAAG TGGAGGTGGT GGAGTTTGGC CCATGGACGC TTGATTTATC TACTCGAACT
TTAAAACGTG ATGGTAACGT GGTCACCTTG ACCACAGGTG AGTTTTCGGT ATTAAAAGCT
TTAGTACAGC ACCCTCGAGA GCCACTCACG CGTGATAAGC TGATGAATTT AGCACGTGGC
AGAGAGTGGG GTGCTATGGA GCGCTCAATC GATGTGCAGG TATCGCGTCT ACGCCGCCTG
ATCGAAGATA ACCCTTCACA GGCTCGTTAT ATCCAGACAG TCTGGGGTGT GGGGTACGTA
TTTGTTCCTG ATGAAGAAGA GGCCTAG
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| Protein sequence | MSDNKINNTD SLTHRILVVD DDARLRSLLQ RFLEDDGFVV RTAHDGSQMD KLMQRELFSL
VVLDLMLPGE DGIAICKRLR EENSDIPIIM LTAKGSDSDR IAGLEAGADD YLPKPFNPKE
LLARIKAVLR RHSRELPGAP SQQVEVVEFG PWTLDLSTRT LKRDGNVVTL TTGEFSVLKA
LVQHPREPLT RDKLMNLARG REWGAMERSI DVQVSRLRRL IEDNPSQARY IQTVWGVGYV
FVPDEEEA
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