Gene DvMF_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1251 
Symbol 
ID7173154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1546455 
End bp1549760 
Gene Length3306 bp 
Protein Length1101 aa 
Translation table11 
GC content67% 
IMG OID643539759 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002435669 
Protein GI218886348 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.000252838 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACCC GCACCGCCTG TCGCGTCTTC TCTCCCCACG CCACCGGCAT CGCCACGCCG 
CGCCCCCCTG CCGCGCGCAC CGCCTTGCGT CTGCCGTCCG CCACAGCATT CGGCCCAGCA
TTCGGCCCGG CATTCTGCCC GGTATCCGCC CTGATATCCG CCCTGACATC CACCCTGACC
TCCGCCCTGC TGTCCATTGC CGCGTGTGCG TTCCTGCTGG CCGCGTGGCC CGCTCCCGGC
CTTGCCGCGC CGCAACGGGC CCTGCTGATC AGTTCCTACC ACCCGGCTTT CCCCACCTTC
TTCCAGCAGA TCGACGGCAT CCGCTCGGAA CTGGACCCGG CGGGCGTGGC CCTGGACGTG
GAATTCATGG ACAGCAAGCG CTTCAACGAC CCGCGCAACC AGGCCCACTT TCTCGACCAC
CTGCGCTACA AGTTGTCCCG CGTGGCCCCG TACGACGTCA TCATCACCTC GGACGACAAC
GCGCTGAACC TTGCCCTGGA ACACCGGGAT GCCCTGTTCC CCGCCACGCC CGTGGTCTTC
TGCGGGGTCA ACAACGTGGC GCTGGCCCAG GGCCTGAGCG GTGCCCCCGC CTTTACCGGG
GTCATCGAGG CCGTTTCCAT GCAGGAAACG CTGGAACTGA TCCGCCTGTT GCGCCCACGC
GGCACCATTC ACGCCATCTC GGACGCCACA TTGTCCGGAC GGGCGGACAT GCTGACCTTT
CGCGAGCTGG CGGCCCGCAA CGTCCCGGCC CCCAGCCGGG AACTGTCGCT GGAAAACCTG
ACCTGGGACG ACCTGGCCCG CCGAGTGGCT GCCCTGCCCG GCACCGACGC CATCCTGCTG
CTTTCGGCGT ACGAAGACGC GGCGGGCGCA CCCAGGCCGT TCGAGGAAAG CCTGGCCTTC
ATCCTGCGCC ACGCCGACGC GCCGGTGTTC CACCTGTGGG AGCATGGCCT GGGCAAGGGG
CTGGCGGGCG GCAAGGTCAT TTCGCACTTC GAGCAGGGAC GCATCGCGGC GCAACTGGCC
CTGCGCATCA TGAACGGCGC ATCCCCCGGC GACATCCCCG TGATCGAGGG CGACGCAGCC
AACAGATACA TCTTCGACCA TCAGGTGCTG GCGCGCTTCG GCATCGCGGA AAGCCAGCTG
CCGCCGGGCA GCCGCATCCT CAACGCCCCC TCGTCGCCGT GGGTGGTCTA CCGGCGCGAA
CTGCGGGTGG CGGCGGCAGC GCTGGTGGTC ATCCTGGCTC TGACGCTCTT CCTGATCTTC
CACGTCATCC GCCTGCGCCA GGCCAGAACG GACGTCCGCC ACAGCGAGGA ACGCTACCGC
ATCCTGTTCG ACCAGTCGCC CGTCGGCATC GCCCACTTCG ACGGCGAAGG CGGCATCATT
GCCCTGAACG CCAAATTCCA GGAAATCGTG GGGGCGCCGC GCCACAAGGT GCTGGGGCTG
AACATGCTGC ACGACGTGCG CGACCCCGAA ATGCTGCGGG CCGTGCGCAC CGCCTTCGAA
GGCGGCATAG GCCGTTACGA GGGCAGCTAC ACCTCGGTGG CGGGCCGCAA GACCACGCTG
GTCAGCTGCA TTCTCAAGTG CATCTTCGCG CCGGGCGGCA GGCACCTGTA CGGACTGATA
ATGGCGGAAG ACCTCACCGA ACGTCGCCGG GCGGAAGACA CCCTGCGCGA ACGCGAAATG
TTCCTGCTGG AAACCCAGCG CATCACCCGC GTGGGCGGGT GGAAGGCGGG CACCCGGTCC
GACAGGCTGG TCTGGACCGA CGAGGTCAAC CGCATCCTCG AGGTGCCGCC GGACTACAAG
CCGGGGCTTG CCGAGAGCAT TTCGTTCTAC GCGCCGGAAT ACCGGCCTGG GGTGTGGCAG
ATGCTGCAGA CCGTGGCCCG CGACGGCACC CCCGTGGATC TGGAATGCGA GGTCGTCACC
AGCCTGGGCG CGCGCAAGTG GACCCACCTG CGCGCGGTGG GCCGCGTGGA AGAGCACGGG
GAACAGCTCA TCCTGGGCAC GCTTCAGGAC ATCACCGAAC GCAAGACGGC GGAAATCGAA
CTGCTCAACG CCAAGCTGCG GGCAGAGGCC GCCAGCAAGG CCAAGAGCGA ATTCCTGGCC
AACATGAGCC ACGAGATACG CACCCCGCTC AACGGCATTC TGGGCATGCT CCAGCTCATG
CACACCACCC GGCTGGGTGC CGAGCAGGCG GACTATGCGG ACATCGCCAT CCAGTCCGGC
AGGCGACTGG CGCGGCTGCT TTCCGACATG CTGGACCTGT CGCGCATCGA ATCGGGCAAG
CTGGATATCC GCCACGTGCC CTTCCAGCTT GCGGCAGCGG TGCAGCAGGT GGTGGAACTG
TTCCTGCCCA TTTCGCTGCA AGCGGGGATA CGGCTCGACG TGCGCATGGA CCCGACCACC
CCCGAAACCT TGCTTGGCGA CATCGTGCGG GTGCAGCAGG TGCTCACCAA CCTGCTGGGC
AATTCCTTCA AGTTCACCAG AATCGGCGGC ATCACCTTGG CGGTCCACCG CCTGCCCCCG
CCGCACGCCC CTGCCTGCCG GGTGCTGTTC ACCATTTCGG ACACGGGGTG CGGCATTCCG
GAAGACAAGC TGGGCGAACT GTTCGAGCCG TTCACCCAGG CCAGCAACGG AATGCGCCGC
TCGCACCAGG GCGCCGGGCT GGGGCTTTCC ATCTGCAAGC GGCTGGTGCA CCTGATGGGC
GGGGAAATCA CCATCGAAAG CGAGGAAGGC GCGGGCACCA CGGCCTGCGT CAGCCTGCCC
TTCACCTTGG TGCCCGATAC CGGCGAAAGG ACGGAGGTGC CGGATACGGC GAATGCGCCT
GACCTTCCCG ATGTGCCCAG TGTTGCCGGC GTGTCCGGCA TGCCTGGCGC GCAGGGTGCG
GCACCGGCCC CCCGGTCAGA TGCGGCCTTG CCCTGCCGGA TCCTGCTGGT GGAAGACGAC
CCGGTAACCC AGCTGGCCGT GCGACGGATG CTGGAAAAGG CGGGCCACAC CGTCACCGTG
GCGGGGGACG GGCGCGCCGG CCTGAACGCG CTGGCTGGCG GCTCGTTCGA CATGGTGCTC
ATGGACATCC AGATGCCCAC CATGGACGGC ATGGAGGCCG TTGCACGCAT TCGCAAGGGT
GAGGCCGGGC CGGACAGGGC GGGCATTCCC ATCGTGGCCC TGACCGCCTA CGCCATGGAG
GGTGACCGGG AACGATTCAT GGGTGCAGGC ATGGACGCCT ACGCCACCAA GCCCACGGAC
ATGGATACGC TGCATGCGGT CATTGGCCGC CTGTGCGGGC AGGGGCAGAC AACACGGCAA
GGATAG
 
Protein sequence
MSTRTACRVF SPHATGIATP RPPAARTALR LPSATAFGPA FGPAFCPVSA LISALTSTLT 
SALLSIAACA FLLAAWPAPG LAAPQRALLI SSYHPAFPTF FQQIDGIRSE LDPAGVALDV
EFMDSKRFND PRNQAHFLDH LRYKLSRVAP YDVIITSDDN ALNLALEHRD ALFPATPVVF
CGVNNVALAQ GLSGAPAFTG VIEAVSMQET LELIRLLRPR GTIHAISDAT LSGRADMLTF
RELAARNVPA PSRELSLENL TWDDLARRVA ALPGTDAILL LSAYEDAAGA PRPFEESLAF
ILRHADAPVF HLWEHGLGKG LAGGKVISHF EQGRIAAQLA LRIMNGASPG DIPVIEGDAA
NRYIFDHQVL ARFGIAESQL PPGSRILNAP SSPWVVYRRE LRVAAAALVV ILALTLFLIF
HVIRLRQART DVRHSEERYR ILFDQSPVGI AHFDGEGGII ALNAKFQEIV GAPRHKVLGL
NMLHDVRDPE MLRAVRTAFE GGIGRYEGSY TSVAGRKTTL VSCILKCIFA PGGRHLYGLI
MAEDLTERRR AEDTLREREM FLLETQRITR VGGWKAGTRS DRLVWTDEVN RILEVPPDYK
PGLAESISFY APEYRPGVWQ MLQTVARDGT PVDLECEVVT SLGARKWTHL RAVGRVEEHG
EQLILGTLQD ITERKTAEIE LLNAKLRAEA ASKAKSEFLA NMSHEIRTPL NGILGMLQLM
HTTRLGAEQA DYADIAIQSG RRLARLLSDM LDLSRIESGK LDIRHVPFQL AAAVQQVVEL
FLPISLQAGI RLDVRMDPTT PETLLGDIVR VQQVLTNLLG NSFKFTRIGG ITLAVHRLPP
PHAPACRVLF TISDTGCGIP EDKLGELFEP FTQASNGMRR SHQGAGLGLS ICKRLVHLMG
GEITIESEEG AGTTACVSLP FTLVPDTGER TEVPDTANAP DLPDVPSVAG VSGMPGAQGA
APAPRSDAAL PCRILLVEDD PVTQLAVRRM LEKAGHTVTV AGDGRAGLNA LAGGSFDMVL
MDIQMPTMDG MEAVARIRKG EAGPDRAGIP IVALTAYAME GDRERFMGAG MDAYATKPTD
MDTLHAVIGR LCGQGQTTRQ G