Gene Dtox_1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1377 
Symbol 
ID8428326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1408871 
End bp1409548 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content43% 
IMG OID645033712 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003190876 
Protein GI258514654 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000301655 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTCAAGCA ATATTTTGGT TATAGATGAT GATCCCAGGA TCACAGCTTT GTTAAAGAGA 
ACTCTTCTTT TTAACGGATA TACGGTTGAA GCAGCCAATG ACGGAAAGGC AGGGATTACT
CTCTTAGAAA ATAATCATTT TGATTTAGTA ATTCTGGACG TGATGATGCC CGGTCTGGAT
GGCTGGCAAG TCTGCGGGCA AATCAGGGAA TACTATGATT TACCCGTTTT AATGTTGACC
GCCAGGGATG AAGTGGAAGA CAGAGTAAAA GGGCTTGATT TGGGAGCCGA TGATTACCTG
GTCAAACCTT TTGCCATGAC TGAGTTACTG GCCAGGATCC GCGCGCTGCT GCGCAGGAGC
GGTAAAACGG AAGCTCAGCC GGCAATACTC AGTTATGCCG ATTTGTCCAT GGATACCGGC
ACCAGAGAGG TATTCAGAAA TAAAAGACAG CTTAATCCAA CTGCCAGGGA ATATGAACTG
TTAAAGCTTT TTATGGAAAA CCCCCGACTG GTACTCAACA AGGAATTGAT CATGGAAAGA
ATATGGGGTT ATGATTACCA GGGCGAATCA AATGTTTTGG AAGTTTATAT TGTCATGCTG
AGAAATAAAT TGGAGGCTTG CGGTGAAAAG CGCCTTATTC ATACAGTGAG AGGAGCAGGT
TATGTATTAA AAGAATAA
 
Protein sequence
MSSNILVIDD DPRITALLKR TLLFNGYTVE AANDGKAGIT LLENNHFDLV ILDVMMPGLD 
GWQVCGQIRE YYDLPVLMLT ARDEVEDRVK GLDLGADDYL VKPFAMTELL ARIRALLRRS
GKTEAQPAIL SYADLSMDTG TREVFRNKRQ LNPTAREYEL LKLFMENPRL VLNKELIMER
IWGYDYQGES NVLEVYIVML RNKLEACGEK RLIHTVRGAG YVLKE