| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3481 |
|---|
| Symbol | |
|---|
| ID | 4255435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 4124774 |
|---|
| End bp | 4125571 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638124166 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_739519 |
|---|
| Protein GI | 114048969 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCATT TATCGCCTAG CGAACTCTCG ATTCTCATTG TTGAGCCATC GGAAACCCAG
CGCCGCATTA TCATCAAGCG TTTACAGCAA GAAGGCATTA TCAGCATCCA AAATGCCGCA
AGTTTGACCC AAGCAAGGGA GTTGATTGCC CGCCACAAGC CGGATCTCAT CGCCAGCGCG
ATGTATTTTG AAGATGGCAC CGCGACCGAT TTTTTAAGCT ATCTGCGCAC CAACAGCGAA
TATAAAGACA TTCAATTTAT GTTGGTTTCG AGCGAATGTC GCCGCGAGCA ATTGGAGATT
TTCCGCCAGT CTGGCGTAGT CGCGATTCTG CCAAAACCTT TTAATGCCGA ACACTTAGGT
AAGGCGCTGA ATGCGACCAT CGATTTGCTC AGCCACGATG AACTCGACCT AAGTCACTTC
GATGTGCATG ACGTGCGTGT GCTAGTTGTC GATGACAGCC GCATGGCGCG TAATGTGATT
AAACGTACTA TTGGCAACCT TGGGATTAAA CAGATTACCG AAGCGGAAGA TGGCGCTCAA
GCCATTGAGT TAATGCGTAA TAATATGTTT GACCTGATCA TTACCGATTA CAATATGCCC
AGTGTTGATG GCCTAGCACT CACTCAATTT ATCCGCAATG AAAGCCAGCA ATCCCATGTT
CCTATCCTCA TGGTGTCTTC GGAGGCAAAT GATGCTCACT TGAGCAATGT CTCGCAGGCG
GGTGTCAATG CCCTGTGCGA TAAACCCTTC GAACCCAAAT TGGTGAAGCA GCTCTTATAT
CAACTGCTCG AAGAATAA
|
|---|
| Protein sequence | MTHLSPSELS ILIVEPSETQ RRIIIKRLQQ EGIISIQNAA SLTQARELIA RHKPDLIASA
MYFEDGTATD FLSYLRTNSE YKDIQFMLVS SECRREQLEI FRQSGVVAIL PKPFNAEHLG
KALNATIDLL SHDELDLSHF DVHDVRVLVV DDSRMARNVI KRTIGNLGIK QITEAEDGAQ
AIELMRNNMF DLIITDYNMP SVDGLALTQF IRNESQQSHV PILMVSSEAN DAHLSNVSQA
GVNALCDKPF EPKLVKQLLY QLLEE
|
|---|
| |