Gene Paes_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1214 
Symbol 
ID6459001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1323382 
End bp1323759 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content43% 
IMG OID642725204 
Productresponse regulator receiver protein 
Protein accessionYP_002015889 
Protein GI194334029 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.678516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000513941 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCATGA AACAGATACT TGTCATTGAC GATGAGCCAG ACATTCTGAG ACTGATCAGG 
AAAATTCTCG AAAATCAGGG TGGATATTCG GTTACGACAG TTGAAAAAGG CAAAAAGGCC
GAAGAAATGA TCGAAACAAC AAAATTCGAT CTTGTCATCA CCGACATCAT CATGCCTGAA
ATCGAAGGTA TGGAAATTAT TTTTTTTCTG AAAAAACACT CTCCCACAAC AAAAATCCTG
GCGATATCGG GAGGAGGAAA ACTTTCGCCT GACGGTTATC TGACGATCGC AAGTACCGCC
GGCGCTCATA GCGTTCTTCA AAAGCCGTTT GAAACACAGG AACTCTTAAG AGAGGTCGAA
CAGCTGCTGT ATCACTGA
 
Protein sequence
MIMKQILVID DEPDILRLIR KILENQGGYS VTTVEKGKKA EEMIETTKFD LVITDIIMPE 
IEGMEIIFFL KKHSPTTKIL AISGGGKLSP DGYLTIASTA GAHSVLQKPF ETQELLREVE
QLLYH