Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1335 |
Symbol | |
ID | 4081007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1397974 |
End bp | 1398351 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638009699 |
Product | response regulator receiver protein |
Protein accession | YP_616382 |
Protein GI | 103486821 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.51819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0884587 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCA TCTTGCTGGC CGAAGACGAC GATGTGATGC GCGAATATCT TGCGCGCGCG CTCACCAGCG CGGGTTATCA CGTCACCGCA GTCGATCGCG GCACGGCGGC AGTGCCCTAT ATCGATTCGG GCACCTTCGA CCTGCTGCTG TCCGACATCG TCATGCCCGA AATGGACGGC ATCGAACTTG CCCAGCATAC GGCAAAGGCG GCCCCGCAGA CGCAGGTGAT GTTCATCACC GGTTTCGCCG CGGTTTCGCT GCGTGCCGAG GAAAATGTGC CGCAGGCCAA GCTCCTGTCC AAACCCTTCC ATCTCAAGGA TCTGGTGCGC GAGGTCGATA GCCTGTTCGG GCGCGCCGAC CAGTCGCACC AGCAATAA
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Protein sequence | MIRILLAEDD DVMREYLARA LTSAGYHVTA VDRGTAAVPY IDSGTFDLLL SDIVMPEMDG IELAQHTAKA APQTQVMFIT GFAAVSLRAE ENVPQAKLLS KPFHLKDLVR EVDSLFGRAD QSHQQ
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