Gene Sala_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1335 
Symbol 
ID4081007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1397974 
End bp1398351 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content61% 
IMG OID638009699 
Productresponse regulator receiver protein 
Protein accessionYP_616382 
Protein GI103486821 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.51819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0884587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCA TCTTGCTGGC CGAAGACGAC GATGTGATGC GCGAATATCT TGCGCGCGCG 
CTCACCAGCG CGGGTTATCA CGTCACCGCA GTCGATCGCG GCACGGCGGC AGTGCCCTAT
ATCGATTCGG GCACCTTCGA CCTGCTGCTG TCCGACATCG TCATGCCCGA AATGGACGGC
ATCGAACTTG CCCAGCATAC GGCAAAGGCG GCCCCGCAGA CGCAGGTGAT GTTCATCACC
GGTTTCGCCG CGGTTTCGCT GCGTGCCGAG GAAAATGTGC CGCAGGCCAA GCTCCTGTCC
AAACCCTTCC ATCTCAAGGA TCTGGTGCGC GAGGTCGATA GCCTGTTCGG GCGCGCCGAC
CAGTCGCACC AGCAATAA
 
Protein sequence
MIRILLAEDD DVMREYLARA LTSAGYHVTA VDRGTAAVPY IDSGTFDLLL SDIVMPEMDG 
IELAQHTAKA APQTQVMFIT GFAAVSLRAE ENVPQAKLLS KPFHLKDLVR EVDSLFGRAD
QSHQQ