More than 300 homologs were found in PanDaTox collection
for query gene DvMF_2841 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011769  DvMF_2841  response regulator receiver protein  100 
 
 
145 aa  291  2e-78  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_2171  response regulator receiver protein  66.94 
 
 
134 aa  155  2e-37  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_1018  response regulator receiver domain-containing protein  55.37 
 
 
131 aa  132  9.999999999999999e-31  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.100773  n/a   
 
 
-
 
NC_002939  GSU1291  response regulator  48.18 
 
 
123 aa  104  4e-22  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2765  response regulator receiver protein  38.14 
 
 
119 aa  88.2  4e-17  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.557597  n/a   
 
 
-
 
NC_010814  Glov_3603  response regulator receiver protein  37.31 
 
 
131 aa  87  8e-17  Geobacter lovleyi SZ  Bacteria  normal  0.656399  n/a   
 
 
-
 
NC_008639  Cpha266_1786  response regulator receiver protein  39.81 
 
 
120 aa  83.6  8e-16  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_2012  response regulator receiver domain-containing protein  38.94 
 
 
122 aa  78.6  0.00000000000003  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.631712 
 
 
-
 
NC_010814  Glov_1827  response regulator receiver protein  36.72 
 
 
130 aa  78.2  0.00000000000003  Geobacter lovleyi SZ  Bacteria  normal  0.32093  n/a   
 
 
-
 
NC_008576  Mmc1_2817  response regulator receiver protein  34.65 
 
 
157 aa  77.8  0.00000000000005  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2047  response regulator receiver protein  34.96 
 
 
157 aa  77  0.00000000000008  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.0637102 
 
 
-
 
NC_013173  Dbac_0418  response regulator receiver protein  36.97 
 
 
123 aa  76.3  0.0000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.22885  n/a   
 
 
-
 
NC_009943  Dole_2807  two component, sigma54 specific, Fis family transcriptional regulator  38.46 
 
 
466 aa  76.3  0.0000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.75933  n/a   
 
 
-
 
NC_007519  Dde_0710  response regulator receiver domain-containing protein  36.36 
 
 
240 aa  75.5  0.0000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_4110  response regulator receiver protein  40 
 
 
126 aa  75.5  0.0000000000003  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_4454  transcriptional regulatory protein ZraR  37.68 
 
 
441 aa  74.3  0.0000000000005  Escherichia coli SMS-3-5  Bacteria  normal  0.209341  hitchhiker  0.000519331 
 
 
-
 
CP001637  EcDH1_3989  two component, sigma54 specific, transcriptional regulator, Fis family  37.82 
 
 
441 aa  73.9  0.0000000000006  Escherichia coli DH1  Bacteria  normal  0.716922  n/a   
 
 
-
 
NC_009801  EcE24377A_4549  transcriptional regulatory protein ZraR  37.82 
 
 
441 aa  73.9  0.0000000000006  Escherichia coli E24377A  Bacteria  hitchhiker  0.000369022  n/a   
 
 
-
 
NC_011353  ECH74115_5475  transcriptional regulatory protein ZraR  37.82 
 
 
441 aa  73.9  0.0000000000007  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E4497  transcriptional regulatory protein ZraR  37.82 
 
 
441 aa  73.9  0.0000000000007  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000279415  n/a   
 
 
-
 
NC_009800  EcHS_A4238  transcriptional regulatory protein ZraR  37.82 
 
 
441 aa  73.9  0.0000000000007  Escherichia coli HS  Bacteria  normal  0.020936  n/a   
 
 
-
 
CP001509  ECD_03881  fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein  37.82 
 
 
441 aa  73.6  0.0000000000008  Escherichia coli BL21(DE3)  Bacteria  normal  0.0124745  n/a   
 
 
-
 
NC_012892  B21_03834  hypothetical protein  37.82 
 
 
441 aa  73.6  0.0000000000008  Escherichia coli BL21  Bacteria  normal  0.0118236  n/a   
 
 
-
 
NC_010468  EcolC_4021  transcriptional regulatory protein ZraR  37.82 
 
 
441 aa  73.6  0.0000000000008  Escherichia coli ATCC 8739  Bacteria  normal  0.0128092  normal  0.0227655 
 
 
-
 
NC_008576  Mmc1_3210  response regulator receiver protein  35.24 
 
 
124 aa  73.6  0.0000000000008  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_0891  response regulator receiver domain-containing protein  37.96 
 
 
137 aa  73.6  0.0000000000009  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0435  response regulator receiver protein  37.29 
 
 
124 aa  72.4  0.000000000002  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00876892  n/a   
 
 
-
 
NC_009972  Haur_3910  multi-sensor hybrid histidine kinase  33.85 
 
 
850 aa  72  0.000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.302032  n/a   
 
 
-
 
NC_013173  Dbac_1017  two component, sigma54 specific, transcriptional regulator, Fis family  36.3 
 
 
445 aa  72.4  0.000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.246569  n/a   
 
 
-
 
NC_008751  Dvul_2709  response regulator receiver sensor signal transduction histidine kinase  40 
 
 
501 aa  72  0.000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  0.710197  normal  0.745824 
 
 
-
 
NC_009012  Cthe_0287  GAF sensor hybrid histidine kinase  35.71 
 
 
1160 aa  72  0.000000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2679  response regulator receiver domain-containing protein  33.06 
 
 
129 aa  70.5  0.000000000007  Geobacter metallireducens GS-15  Bacteria  normal  0.380915  normal  0.27601 
 
 
-
 
NC_011059  Paes_1214  response regulator receiver protein  36.61 
 
 
125 aa  69.7  0.00000000001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.678516  hitchhiker  0.000513941 
 
 
-
 
NC_007963  Csal_0717  two component, sigma54 specific, Fis family transcriptional regulator  36.97 
 
 
466 aa  69.7  0.00000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0776  response regulator receiver protein  36.94 
 
 
127 aa  70.1  0.00000000001  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00000835167  normal  0.370558 
 
 
-
 
NC_010803  Clim_1831  multi-sensor signal transduction histidine kinase  37.84 
 
 
685 aa  70.1  0.00000000001  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0823  two component, sigma54 specific, transcriptional regulator, Fis family  34.82 
 
 
456 aa  68.9  0.00000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.449732 
 
 
-
 
NC_010814  Glov_2957  PAS/PAC sensor hybrid histidine kinase  35.83 
 
 
810 aa  68.2  0.00000000004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_2907  two component, sigma54 specific, Fis family transcriptional regulator  32.46 
 
 
454 aa  68.2  0.00000000004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2820  transcriptional regulatory protein ZraR  32.46 
 
 
454 aa  67.8  0.00000000005  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0548  two component, sigma54 specific, transcriptional regulator, Fis family  37.61 
 
 
452 aa  67  0.00000000007  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.902927  normal 
 
 
-
 
NC_012912  Dd1591_4159  nitrogen regulation protein NR(I)  37.04 
 
 
470 aa  67  0.00000000007  Dickeya zeae Ech1591  Bacteria  normal  0.086406  n/a   
 
 
-
 
NC_002939  GSU1117  response regulator  34.17 
 
 
127 aa  67  0.00000000008  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2017  response regulator CheY  33.04 
 
 
129 aa  67  0.00000000008  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3962  nitrogen regulation protein NR(I)  37.04 
 
 
470 aa  67  0.00000000008  Dickeya dadantii Ech703  Bacteria  normal  0.389706  n/a   
 
 
-
 
NC_013173  Dbac_0976  anti-sigma-factor antagonist  32.76 
 
 
237 aa  66.6  0.0000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0387  multi-sensor hybrid histidine kinase  33.87 
 
 
1068 aa  66.2  0.0000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0401  sensor histidine kinase/response regulator  35.96 
 
 
1392 aa  66.6  0.0000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4581  transcriptional regulatory protein ZraR  35.29 
 
 
441 aa  66.6  0.0000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4385  transcriptional regulatory protein ZraR  35.29 
 
 
441 aa  66.6  0.0000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.712665 
 
 
-
 
NC_013730  Slin_2666  two component transcriptional regulator, AraC family  28.89 
 
 
251 aa  66.2  0.0000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.21287  normal  0.224489 
 
 
-
 
NC_011080  SNSL254_A4507  transcriptional regulatory protein ZraR  35.29 
 
 
441 aa  66.6  0.0000000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.0570238 
 
 
-
 
NC_009483  Gura_2934  response regulator receiver protein  32.5 
 
 
129 aa  65.9  0.0000000002  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000852899  n/a   
 
 
-
 
NC_011149  SeAg_B4418  transcriptional regulatory protein ZraR  34.45 
 
 
441 aa  65.5  0.0000000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.298897  n/a   
 
 
-
 
NC_012918  GM21_2553  response regulator receiver protein  33.33 
 
 
126 aa  65.5  0.0000000002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.1194499999999997e-20 
 
 
-
 
NC_007512  Plut_1258  two component Fis family transcriptional regulator  32.77 
 
 
486 aa  65.5  0.0000000002  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1618  nitrogen metabolism transcriptional regulator, NtrC, Fis family  36.07 
 
 
486 aa  65.9  0.0000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0334  response regulator receiver protein  32.74 
 
 
124 aa  65.5  0.0000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00357504  n/a   
 
 
-
 
NC_011146  Gbem_1660  response regulator receiver protein  33.33 
 
 
126 aa  65.5  0.0000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2467  response regulator receiver modulated serine phosphatase  28.77 
 
 
385 aa  65.1  0.0000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_002967  TDE1969  sigma-54 dependent transcriptional regulator/response regulator  39.09 
 
 
473 aa  65.1  0.0000000003  Treponema denticola ATCC 35405  Bacteria  normal  0.440374  n/a   
 
 
-
 
NC_012917  PC1_4222  nitrogen regulation protein NR(I)  36.11 
 
 
470 aa  65.5  0.0000000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.327829  n/a   
 
 
-
 
NC_011083  SeHA_C4505  transcriptional regulatory protein ZraR  34.45 
 
 
441 aa  65.1  0.0000000003  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.11324 
 
 
-
 
NC_013421  Pecwa_4505  nitrogen regulation protein NR(I)  36.11 
 
 
470 aa  65.5  0.0000000003  Pectobacterium wasabiae WPP163  Bacteria  normal  0.565329  n/a   
 
 
-
 
NC_011769  DvMF_2149  two component, sigma54 specific, transcriptional regulator, Fis family  35.65 
 
 
477 aa  65.5  0.0000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_0427  two component, sigma54 specific, Fis family transcriptional regulator  30.43 
 
 
458 aa  65.5  0.0000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0123  DNA-binding response regulator  32.06 
 
 
223 aa  64.7  0.0000000004  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4753  PAS/PAC sensor hybrid histidine kinase  34.45 
 
 
630 aa  64.7  0.0000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_3108  two component, sigma54 specific, Fis family transcriptional regulator  36.45 
 
 
461 aa  64.7  0.0000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0717  two component transcriptional regulator, winged helix family  33.61 
 
 
226 aa  64.3  0.0000000005  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.000154116  n/a   
 
 
-
 
NC_009675  Anae109_2258  two component, sigma54 specific, Fis family transcriptional regulator  33.91 
 
 
468 aa  64.3  0.0000000006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.428008  normal  0.0222917 
 
 
-
 
NC_009832  Spro_4883  nitrogen regulation protein NR(I)  35.19 
 
 
470 aa  64.3  0.0000000006  Serratia proteamaculans 568  Bacteria  normal  0.177074  hitchhiker  0.0000322182 
 
 
-
 
NC_007963  Csal_0246  nitrogen metabolism transcriptional regulator, NtrC, Fis family  35.78 
 
 
469 aa  64.3  0.0000000006  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.487777  n/a   
 
 
-
 
NC_013061  Phep_0587  ATP-binding region ATPase domain protein  32.48 
 
 
1161 aa  63.9  0.0000000007  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_1321  response regulator receiver protein  37.29 
 
 
120 aa  63.9  0.0000000007  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1312  two component, sigma54 specific, Fis family transcriptional regulator  35 
 
 
455 aa  63.9  0.0000000008  Desulfotomaculum reducens MI-1  Bacteria  normal  0.502008  n/a   
 
 
-
 
NC_014212  Mesil_2092  response regulator receiver protein  29.84 
 
 
298 aa  63.9  0.0000000008  Meiothermus silvanus DSM 9946  Bacteria  normal  0.748601  normal 
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  36.59 
 
 
513 aa  63.9  0.0000000008  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_009767  Rcas_1114  response regulator receiver modulated serine phosphatase  36.21 
 
 
391 aa  63.5  0.0000000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_0411  two component transcriptional regulator  29.32 
 
 
230 aa  63.5  0.0000000009  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  37.84 
 
 
153 aa  63.5  0.0000000009  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_014165  Tbis_0185  GAF sensor hybrid histidine kinase  33.33 
 
 
1214 aa  63.5  0.0000000009  Thermobispora bispora DSM 43833  Bacteria  normal  0.467777  normal  0.706209 
 
 
-
 
NC_012918  GM21_3243  PAS sensor protein  33.93 
 
 
1323 aa  62.8  0.000000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007498  Pcar_2015  two component hybrid sensor response regulator  40.51 
 
 
391 aa  63.2  0.000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0528  two component heavy metal response transcriptional regulator  33.64 
 
 
223 aa  63.2  0.000000001  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6539  nitrogen metabolism transcriptional regulator, NtrC, Fis Family  32.58 
 
 
485 aa  63.5  0.000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0337  response regulator receiver protein  35.14 
 
 
139 aa  62.8  0.000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0132867 
 
 
-
 
NC_007643  Rru_A1678  nitrogen metabolism transcriptional regulator, NtrC, Fis family  29.86 
 
 
481 aa  63.2  0.000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.510429  n/a   
 
 
-
 
NC_011080  SNSL254_A4287  nitrogen regulation protein NR(I)  35.19 
 
 
469 aa  63.5  0.000000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0756679  normal 
 
 
-
 
NC_011886  Achl_2652  two component transcriptional regulator, winged helix family  34.48 
 
 
264 aa  62.8  0.000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010086  Bmul_3193  signal transduction histidine kinase with CheB and CheR activity  35.2 
 
 
1380 aa  63.2  0.000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.112764 
 
 
-
 
NC_011205  SeD_A4394  nitrogen regulation protein NR(I)  35.19 
 
 
469 aa  63.5  0.000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4216  nitrogen regulation protein NR(I)  35.19 
 
 
469 aa  63.5  0.000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.295301  normal 
 
 
-
 
NC_009943  Dole_1977  response regulator receiver protein  35 
 
 
265 aa  63.2  0.000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3926  two component transcriptional regulator  34.26 
 
 
254 aa  63.2  0.000000001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0845  response regulator receiver modulated metal dependent phosphohydrolase  34.4 
 
 
508 aa  63.2  0.000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.903712  hitchhiker  0.00198769 
 
 
-
 
NC_008261  CPF_1056  DNA-binding response regulator  27.59 
 
 
226 aa  62.8  0.000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.775205  n/a   
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  36.7 
 
 
462 aa  63.2  0.000000001  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_011083  SeHA_C4333  nitrogen regulation protein NR(I)  35.19 
 
 
469 aa  63.5  0.000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.140715  normal 
 
 
-
 
NC_008705  Mkms_4000  two component transcriptional regulator  34.26 
 
 
254 aa  63.2  0.000000001  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>