| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1678 |
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| Symbol | |
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| ID | 3835098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1967836 |
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| End bp | 1969281 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637825773 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_426765 |
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| Protein GI | 83593013 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.510429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACGA TTCTGGTGGC CGATGACGAT CGCGGAATCC GCACGGTTCT CAGTCAGGCT
CTGACCCGGG CCGGCCACGA GGTGCGCAGC ACCGGTACGG CCTCGACCCT GTGGAGCTGG
GTCACCGATG GTCAGGGCGA TCTGGTGATC ACCGATGTCA TCATGCCCGA CGAGAACGGC
CTCGACCTGA TTCCGCGGAT CAAGAAGATC CGCCCCGACC TGCGCATCGT CGTCATGAGC
GCCCAGAACA CCTTGCTGAC GGCGGTCAAG GCCACCGAGC GCGGCGCCTT TGAATATCTG
CCCAAGCCCT TCGATTTGAC CGAGGTGGTC AATGTCGTGC GCCGGGCCTT GTCGCTGCCC
AGGGGCAATC CGACCGAGGG CGACCATGCT AGCGAGGAAG ACGAGCGCCT GCCGCTGATC
GGCCGCTCGC CGGCGATGCA GGAGATCTAC CGCACCCTGG CCCGGCTGAT GAACACCGAT
CTGACGGTGA TGATCAACGG CGAATCGGGA ACGGGCAAGG AACTGGTCGC CCGCGCCCTG
CATGATTACG GCAAGCGCCG CAACGGCTCG TTCGTCGCCG TCAACATGGG GGCGATCCCG
CGCGAACTGA TCGAAAGCGA ATTGTTCGGC CACGAGAAGG GCGCCTTCAC CGGCGCCCAT
GCCCGCTCGG CCGGACGCTT CGAACAGGCC GATGGCGGCA CCTTGTTCCT AGACGAGATC
GGCGACATGC CGCTGGAAGC GCAAACCCGG TTGCTGCGCG TGCTTCAGGA AAGCGAATAC
ACCACCGTTG GCGGCCGCCA GACCCTGCGG GCCAATGTGC GCATCATCGC CGCCACCCAC
CGCGACCTGC GCCAGCTTAT TCATCAAGGA TTGTTCCGCG AGGATTTGTT CTATCGGCTC
AACGTCGTGC CGCTGCGCCT GCCGCCTTTG CGCGAGCGCG TCGAGGACAT CCCCGAACTG
ACCCGCCATT TCCTGCATGC GGTGGCCGAG CATGACGGCC TGCCGCCCAA GGTGCTGGAG
GCCCCGGCGA TGGAACGGCT GAAAAAACAC CGCTGGTCGG GCAATGTCCG CGAACTGGAA
AATCTGGTGC GCCGTCTGGC CGCGCTCTAT TCCCAGGAAG TCATCGGCGT CGAGGTCATC
GAGGCCGAAT TGTCGTCTTC GGCGCCGCCG ATCCTTGACG AGGGCGATGA ATCGGCCGAG
GGGCTGTCGA CCAAGGTCGA ACGCCATCTT CGCCATTATT TCGAAGCCCA TGGCGAGGCC
CTGCCGCCGG CCGGCCTGCA CGAGCGGATC AGCCGCGAGG TCGAGCGGCC GCTGATTTCC
CTGTGTCTGG AGGCGACGCG CGGCAATCAG ATCAAGGCCG CCCAATTGCT CGGCCTCAAC
CGCAATACCC TGCGCAAGAA GATCCGGGAT CTCGATATCC AGGTCGTGCG CGGCGTCAAG
GGCTAG
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| Protein sequence | MSTILVADDD RGIRTVLSQA LTRAGHEVRS TGTASTLWSW VTDGQGDLVI TDVIMPDENG
LDLIPRIKKI RPDLRIVVMS AQNTLLTAVK ATERGAFEYL PKPFDLTEVV NVVRRALSLP
RGNPTEGDHA SEEDERLPLI GRSPAMQEIY RTLARLMNTD LTVMINGESG TGKELVARAL
HDYGKRRNGS FVAVNMGAIP RELIESELFG HEKGAFTGAH ARSAGRFEQA DGGTLFLDEI
GDMPLEAQTR LLRVLQESEY TTVGGRQTLR ANVRIIAATH RDLRQLIHQG LFREDLFYRL
NVVPLRLPPL RERVEDIPEL TRHFLHAVAE HDGLPPKVLE APAMERLKKH RWSGNVRELE
NLVRRLAALY SQEVIGVEVI EAELSSSAPP ILDEGDESAE GLSTKVERHL RHYFEAHGEA
LPPAGLHERI SREVERPLIS LCLEATRGNQ IKAAQLLGLN RNTLRKKIRD LDIQVVRGVK
G
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