More than 300 homologs were found in PanDaTox collection
for query gene Mmc1_2817 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008576  Mmc1_2817  response regulator receiver protein  100 
 
 
157 aa  323  6e-88  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2047  response regulator receiver protein  99.36 
 
 
157 aa  322  1e-87  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.0637102 
 
 
-
 
NC_008576  Mmc1_0776  response regulator receiver protein  52.59 
 
 
127 aa  124  5e-28  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00000835167  normal  0.370558 
 
 
-
 
NC_013173  Dbac_0418  response regulator receiver protein  44.17 
 
 
123 aa  102  2e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.22885  n/a   
 
 
-
 
NC_010571  Oter_4110  response regulator receiver protein  38.21 
 
 
126 aa  95.1  3e-19  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_1018  response regulator receiver domain-containing protein  36.89 
 
 
131 aa  92.8  1e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.100773  n/a   
 
 
-
 
NC_008576  Mmc1_3210  response regulator receiver protein  36.67 
 
 
124 aa  92.4  2e-18  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2171  response regulator receiver protein  36.44 
 
 
134 aa  84  7e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_2012  response regulator receiver domain-containing protein  37.5 
 
 
122 aa  81.3  0.000000000000005  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.631712 
 
 
-
 
NC_011059  Paes_1214  response regulator receiver protein  39.34 
 
 
125 aa  79.3  0.00000000000002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.678516  hitchhiker  0.000513941 
 
 
-
 
NC_007512  Plut_0891  response regulator receiver domain-containing protein  35.25 
 
 
137 aa  78.6  0.00000000000003  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3577  response regulator receiver protein  36.36 
 
 
393 aa  78.6  0.00000000000003  Pseudomonas putida F1  Bacteria  decreased coverage  0.00266085  normal 
 
 
-
 
NC_011769  DvMF_2841  response regulator receiver protein  34.65 
 
 
145 aa  77.8  0.00000000000005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU1291  response regulator  39.84 
 
 
123 aa  77.8  0.00000000000006  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0010  PAS/PAC sensor hybrid histidine kinase  34.45 
 
 
508 aa  77  0.00000000000008  Geobacter metallireducens GS-15  Bacteria  normal  0.0502065  normal 
 
 
-
 
NC_002947  PP_2165  response regulator  35.54 
 
 
393 aa  77  0.0000000000001  Pseudomonas putida KT2440  Bacteria  normal  0.0249002  normal  0.813701 
 
 
-
 
NC_010322  PputGB1_1706  response regulator receiver modulated serine phosphatase  35.54 
 
 
393 aa  76.6  0.0000000000001  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000168842 
 
 
-
 
NC_010501  PputW619_1682  response regulator receiver modulated serine phosphatase  34.68 
 
 
412 aa  76.6  0.0000000000001  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_1786  response regulator receiver protein  36.21 
 
 
120 aa  76.3  0.0000000000002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2784  response regulator receiver protein  33.33 
 
 
125 aa  75.1  0.0000000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0945133  n/a   
 
 
-
 
NC_002939  GSU0008  sensory box histidine kinase/response regulator  35.59 
 
 
516 aa  74.7  0.0000000000004  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3849  response regulator receiver (CheY) modulated Serine phosphatase  34.71 
 
 
412 aa  74.3  0.0000000000007  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.658628 
 
 
-
 
NC_013223  Dret_0097  two component, sigma54 specific, transcriptional regulator, Fis family  33.61 
 
 
448 aa  72.8  0.000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2453  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
461 aa  72.4  0.000000000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000196128  normal 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  32.52 
 
 
461 aa  71.6  0.000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  30.43 
 
 
513 aa  72  0.000000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_011146  Gbem_2160  two component, sigma54 specific, transcriptional regulator, Fis family  31.82 
 
 
449 aa  72  0.000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3940  putative two-component response regulatory protein, response regulator receiver  34.62 
 
 
155 aa  72  0.000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.238381  normal  0.445341 
 
 
-
 
NC_012918  GM21_2062  two component, sigma54 specific, transcriptional regulator, Fis family  32.58 
 
 
449 aa  71.2  0.000000000005  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000000000496565 
 
 
-
 
NC_004578  PSPTO_2117  response regulator  34.71 
 
 
394 aa  71.2  0.000000000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0129975  n/a   
 
 
-
 
NC_007005  Psyr_1912  response regulator receiver:stage II sporulation E  34.71 
 
 
394 aa  70.9  0.000000000006  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.432168  hitchhiker  0.00180426 
 
 
-
 
NC_012918  GM21_1570  transcriptional regulator, XRE family  33.61 
 
 
233 aa  70.9  0.000000000006  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011312  VSAL_I1082  response regulator  33.83 
 
 
367 aa  70.9  0.000000000006  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2018  two component, sigma-54 specific, Fis family transcriptional regulator  33.33 
 
 
447 aa  70.1  0.00000000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.110893  n/a   
 
 
-
 
NC_011060  Ppha_2765  response regulator receiver protein  32.2 
 
 
119 aa  69.7  0.00000000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.557597  n/a   
 
 
-
 
NC_009802  CCC13826_0722  response regulator receiver domain-containing protein  35.77 
 
 
227 aa  69.7  0.00000000001  Campylobacter concisus 13826  Bacteria  normal  0.0554017  n/a   
 
 
-
 
NC_011145  AnaeK_3251  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
465 aa  69.7  0.00000000001  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3211  response regulator receiver domain-containing protein  33.88 
 
 
122 aa  68.9  0.00000000002  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.0000000000097826 
 
 
-
 
NC_007796  Mhun_2691  putative PAS/PAC sensor protein  30.16 
 
 
385 aa  69.3  0.00000000002  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.10412 
 
 
-
 
NC_009767  Rcas_0845  response regulator receiver modulated metal dependent phosphohydrolase  31.75 
 
 
508 aa  68.9  0.00000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.903712  hitchhiker  0.00198769 
 
 
-
 
NC_009767  Rcas_0846  response regulator receiver protein  31.4 
 
 
139 aa  69.3  0.00000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  hitchhiker  0.00282438 
 
 
-
 
NC_008781  Pnap_1956  two component, sigma54 specific, Fis family transcriptional regulator  29.92 
 
 
486 aa  69.7  0.00000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.696783  normal 
 
 
-
 
NC_012034  Athe_2159  response regulator receiver protein  33.87 
 
 
120 aa  68.6  0.00000000003  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00200925  n/a   
 
 
-
 
NC_010814  Glov_1827  response regulator receiver protein  30.95 
 
 
130 aa  68.6  0.00000000003  Geobacter lovleyi SZ  Bacteria  normal  0.32093  n/a   
 
 
-
 
NC_011146  Gbem_2665  transcriptional regulator, XRE family  32.79 
 
 
233 aa  68.6  0.00000000003  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00000943632  n/a   
 
 
-
 
NC_008751  Dvul_1875  response regulator receiver modulated metal dependent phosphohydrolase  36.89 
 
 
361 aa  68.6  0.00000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1782  sensor histidine kinase/response regulator  34.91 
 
 
783 aa  68.2  0.00000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1760  response regulator receiver modulated diguanylate cyclase  34.17 
 
 
473 aa  68.2  0.00000000004  Geobacter lovleyi SZ  Bacteria  normal  0.554911  n/a   
 
 
-
 
NC_011353  ECH74115_5475  transcriptional regulatory protein ZraR  31.93 
 
 
441 aa  67.8  0.00000000005  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_2257  GAF sensor hybrid histidine kinase  36.51 
 
 
1162 aa  67.8  0.00000000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3415  two component, sigma-54 specific, Fis family transcriptional regulator  35.71 
 
 
453 aa  67.8  0.00000000005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4454  transcriptional regulatory protein ZraR  31.93 
 
 
441 aa  67.8  0.00000000005  Escherichia coli SMS-3-5  Bacteria  normal  0.209341  hitchhiker  0.000519331 
 
 
-
 
CP001509  ECD_03881  fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein  31.93 
 
 
441 aa  67.8  0.00000000006  Escherichia coli BL21(DE3)  Bacteria  normal  0.0124745  n/a   
 
 
-
 
CP001637  EcDH1_3989  two component, sigma54 specific, transcriptional regulator, Fis family  31.93 
 
 
441 aa  67.8  0.00000000006  Escherichia coli DH1  Bacteria  normal  0.716922  n/a   
 
 
-
 
NC_010658  SbBS512_E4497  transcriptional regulatory protein ZraR  31.93 
 
 
441 aa  67.8  0.00000000006  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000279415  n/a   
 
 
-
 
NC_009767  Rcas_3671  multi-sensor hybrid histidine kinase  31.75 
 
 
1034 aa  67.8  0.00000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_03834  hypothetical protein  31.93 
 
 
441 aa  67.8  0.00000000006  Escherichia coli BL21  Bacteria  normal  0.0118236  n/a   
 
 
-
 
NC_010468  EcolC_4021  transcriptional regulatory protein ZraR  31.93 
 
 
441 aa  67.8  0.00000000006  Escherichia coli ATCC 8739  Bacteria  normal  0.0128092  normal  0.0227655 
 
 
-
 
NC_009801  EcE24377A_4549  transcriptional regulatory protein ZraR  31.93 
 
 
441 aa  67.8  0.00000000006  Escherichia coli E24377A  Bacteria  hitchhiker  0.000369022  n/a   
 
 
-
 
NC_011830  Dhaf_4140  response regulator receiver protein  33.87 
 
 
120 aa  67.8  0.00000000006  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000406755  n/a   
 
 
-
 
NC_009800  EcHS_A4238  transcriptional regulatory protein ZraR  31.93 
 
 
441 aa  67.8  0.00000000006  Escherichia coli HS  Bacteria  normal  0.020936  n/a   
 
 
-
 
NC_010506  Swoo_0829  multi-sensor hybrid histidine kinase  32.81 
 
 
1240 aa  67.4  0.00000000007  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0187  response regulator receiver protein  34.43 
 
 
120 aa  67.4  0.00000000008  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0168  two component, sigma54 specific, Fis family transcriptional regulator  30 
 
 
459 aa  67.4  0.00000000008  Desulfovibrio vulgaris DP4  Bacteria  normal  0.564625  normal  0.730975 
 
 
-
 
NC_003909  BCE_5466  stage 0 sporulation protein F  29.6 
 
 
122 aa  66.6  0.0000000001  Bacillus cereus ATCC 10987  Bacteria  normal  0.0750811  n/a   
 
 
-
 
NC_005945  BAS5185  stage 0 sporulation protein F  29.6 
 
 
122 aa  66.6  0.0000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.0413406  n/a   
 
 
-
 
NC_005957  BT9727_5020  stage 0 sporulation protein F  29.6 
 
 
122 aa  66.6  0.0000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000180816  n/a   
 
 
-
 
NC_006274  BCZK5036  stage 0 sporulation protein F  29.6 
 
 
122 aa  66.6  0.0000000001  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000000486089  n/a   
 
 
-
 
NC_011773  BCAH820_5429  sporulation initiation phosphotransferase F  29.6 
 
 
122 aa  66.6  0.0000000001  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.26925e-31 
 
 
-
 
NC_007517  Gmet_1918  PAS/PAC sensor hybrid histidine kinase  34.88 
 
 
650 aa  67  0.0000000001  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.204421 
 
 
-
 
NC_009674  Bcer98_3857  response regulator receiver protein  29.17 
 
 
122 aa  66.6  0.0000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.161717  n/a   
 
 
-
 
NC_007530  GBAA_5581  stage 0 sporulation protein F  29.6 
 
 
122 aa  66.6  0.0000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0132264  n/a   
 
 
-
 
NC_011725  BCB4264_A5459  sporulation initiation phosphotransferase F  29.6 
 
 
122 aa  66.6  0.0000000001  Bacillus cereus B4264  Bacteria  hitchhiker  0.000856307  n/a   
 
 
-
 
NC_011658  BCAH187_A5514  sporulation initiation phosphotransferase F  29.6 
 
 
122 aa  66.6  0.0000000001  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000170867  n/a   
 
 
-
 
NC_008639  Cpha266_1801  integral membrane sensor hybrid histidine kinase  31.01 
 
 
699 aa  66.6  0.0000000001  Chlorobium phaeobacteroides DSM 266  Bacteria  unclonable  0.00000631548  n/a   
 
 
-
 
NC_011883  Ddes_0853  two component, sigma54 specific, transcriptional regulator, Fis family  30 
 
 
459 aa  66.6  0.0000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0538681  n/a   
 
 
-
 
NC_009441  Fjoh_5047  two component, sigma54 specific, Fis family transcriptional regulator  34.15 
 
 
387 aa  65.9  0.0000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0897789  n/a   
 
 
-
 
NC_002939  GSU1320  sigma-54 dependent DNA-binding response regulator  30.83 
 
 
460 aa  66.2  0.0000000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0673  two component, sigma54 specific, transcriptional regulator, Fis family  31.71 
 
 
457 aa  66.2  0.0000000002  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0790  two component, sigma54 specific, transcriptional regulator, Fis family  31.9 
 
 
466 aa  66.2  0.0000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_0337  response regulator receiver protein  31.9 
 
 
139 aa  66.2  0.0000000002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0132867 
 
 
-
 
NC_013173  Dbac_0628  two component, sigma54 specific, transcriptional regulator, Fis family  29.51 
 
 
446 aa  65.9  0.0000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0885  response regulator receiver protein  33.33 
 
 
205 aa  65.9  0.0000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0639  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
455 aa  65.9  0.0000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  33.86 
 
 
127 aa  66.2  0.0000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5134  response regulator receiver protein  29.6 
 
 
122 aa  66.2  0.0000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0135031  n/a   
 
 
-
 
NC_008576  Mmc1_1834  CheA signal transduction histidine kinases  34.4 
 
 
878 aa  65.9  0.0000000002  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0710  two component, sigma54 specific, Fis family transcriptional regulator  36.07 
 
 
456 aa  66.2  0.0000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0673  two component, sigma54 specific, transcriptional regulator, Fis family  31.71 
 
 
458 aa  66.2  0.0000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2825  transcriptional regulator ZraR  35 
 
 
445 aa  65.5  0.0000000003  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.479389  normal 
 
 
-
 
NC_007413  Ava_2324  two component LuxR family transcriptional regulator  42.47 
 
 
245 aa  65.5  0.0000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.42123  normal 
 
 
-
 
NC_007413  Ava_4696  GAF sensor hybrid histidine kinase  35.77 
 
 
1917 aa  65.5  0.0000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.257042  normal 
 
 
-
 
NC_011149  SeAg_B2721  sigma-54 dependent transcriptional regulator/response regulator  35 
 
 
445 aa  65.5  0.0000000003  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2938  transcriptional regulator ZraR  35 
 
 
445 aa  65.5  0.0000000003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1404  two component transcriptional regulator  32.28 
 
 
229 aa  65.5  0.0000000003  Synechococcus elongatus PCC 7942  Bacteria  normal  0.153238  normal 
 
 
-
 
NC_007643  Rru_A2234  response regulator receiver domain-containing protein  28.46 
 
 
130 aa  65.1  0.0000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3017  RcsC  32.11 
 
 
1083 aa  65.5  0.0000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2763  transcriptional regulator ZraR  35 
 
 
445 aa  65.5  0.0000000003  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3494  response regulator receiver protein  31.45 
 
 
120 aa  65.1  0.0000000003  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.313433 
 
 
-
 
NC_011094  SeSA_A2804  transcriptional regulatory protein ZraR  35 
 
 
445 aa  65.5  0.0000000003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
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