Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3017 |
Symbol | |
ID | 5358718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 3111884 |
End bp | 3115135 |
Gene Length | 3252 bp |
Protein Length | 1083 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640812068 |
Product | RcsC |
Protein accession | YP_001348377 |
Protein GI | 152987767 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGTCCG TCCGTATCCT GGAACATGAC AACAAGCTGC TGCTCAAGTG GGCGAGCGTC TCGCGGAGCC TGAACATCGG GCTGCTCTGC GTGGCGGTAT TGACCGTATT GCTGTTCAGC ATCTGCTACT GGTCGTTGGG GCGACTGCTC CAGGAAGAAG AGGACAAGGT TTCCTTCCAC TTCACCCGGC TGATCGGCGA CATACGGGAA CACGAGGCCT TCCTCGTGCG CATCGCACGC AAAAGCGACA AGGCCACGCA GAAGCACGAC CATGACGTGG TGCCCCTGCA ACGCCGGCTC CTGGCCAGGG AAGAAGGTGT CGAGGTCTAT GAGGGGCGGG AATTTTCCTT TGCCATGCCG TTCCTCCTGG CTACTCGCCA CGGGGTCGAC AGGAATGCGT CGTGGGGGCC GTTCTCCCTG GGCGTCCTGC TCGCCAACTT CTACGGCGGC TTCTGGAGCC TTTCGGCATA CCCCGCGCCG CAACTGCTGA TCTACGATCT TTCCGGAAGT ACCCGCCTGG CCGTGCCGGC GATCCACGCC ATGGCGGAAC GCGAGAGGCT GCGCGAGAAC CAGCCGATGA TGGTCGACCG CATGCTGGCG CGCCTGCGCG AAACGCCACC GGGCGCCGCC GACCACCCTG TGCATTGGGT GCGCGCGGAC CGCTATCGGG GGCAGGCGCC CGAGCTCCTG GGAATCGTCA GGGTCGATCT GCCGGAAGCC CTGTGGTGGC GGGATGAGCC GAACCACCTG ATCGTTGCCG CGAGTCTGCT CGACCTGCGG AGGATCAACG ATTTCGAGCA ATTGATGGAG CGTCCGGTGT TCGACTCGTA CAGCCTGGTT TCGCCGGAGG GCGATCTGCT GGTGGGCGAG ACACCGGCCG AAGGGCTTGG CGACGGCCTG AACTTCACCC GCCACGGGGT GGCGATTCAA CTGCGCAGCC AACCCGCAGG CGGCTGGCTC GCGGTCTACC GCATCGGTTA CGCCAGTTTC TTTCGCCATG CCCAATGGCT GCTGGCCGGC CTGCTGCTGG TTCCGGCGCT CGTCCTGGGC GGCTGGCTCG GCCTGCGCTG GTACGCGCGC AGCGTCGTCC ATCCCGCGCA TCGGGCGCAC CAGCAACTCG TCGAGAGCGA CACGTTCAGC CGGACCCTGA TCCAGACCGC GCCGGTGGCG CTGGTGGTAC TCAGCCAGGA TGGTCGGCAA CTGGTGACCT GCAACCAGCT GGCCGGCCAG TGGCTGGGCG GGGCCGCGGA GATCCTCGCC CTGACGTCCC GCTGGAAACT GCTCGACGCC CAGGGGCAGG TGGCGGGAGG CATCTGTGTG CAGGTCGGCG GGCGCTACCT GCAGGCGGCT TTCGCCGCGA CCCGCTATGC CGGCACGGAG GCGGTGCTGT GCGTGTTCAA CGACATTACC GTGCATTGCG AGGCGGAGGC GGCGCTGGCC AGCGCCAAGC GGGCGGCTGA CGCTGCCAGC CAGGCCAAGA CGTTGTTCCT GGCCAGCATG AGCCATGAGA TCCGTACCCC CCTGTACGGT GTCCTCGGCA CCCTCGAACT GCTCGATCTC ACCGAGCTGA ACGAGAGGCA GCGCGCGTAT CTGCGGACCA TCCAGGGCGC CTCCGGGACG CTCATGCAAC TGATCAGCGA TGTACTGGAC GTCTCGAAGA TCGAGGCGGG GCAGATGGCC CTGGCGCCTG TCGTCTTCGA TCCACTGGAA CTCACGCAGG AAGTGCTTGG CAGCTTCTCC GCCAGCGCCA TGGCCAAGGG GTTGCAATTC TATGCCTGCA TCGACCCCGA CGTACCCGCG CAGTTGATCG GCGACGTGGC GCGGATCCGC CAGGTCCTCG CCAACCTGGT GAGCAACGCA GTGAAGTTCA CCGATATCGG TCGTGTGGTC CTGCGCCTGA AATTGCTGTC ACGGGAGGAG GGTCGGGCCG CCTTGCAGTG GCAGGTTGCC GATACCGGCA TCGGTATCGC GATCGAACAG CAGAAACGCT TGTTCGAGGC TTTCTATCAG GTGCCCGGGG TGCCCCATGC CGGCGGCACG GGGCTGGGCC TGTCGATCTG CTGGCATCTC GCGGAGATGA TGGGTGGCAC GCTGCGTGTC GTCAGCGAAG CGGGGCTGGG CAGCAGCTTC AGCCTGGTGC TGGATCTGCC CGAGACCGAA CCGGAGGGAC TGGCCCGCCA ACCGGAACGC TGGCTGCAGG GAGCTGTCCT GGTGCGTTCG CCGGTGCGCG AACTGGCCGA CAGCCTGAGC GGCTGGCTGG CACGCTGGGG CTGTACCGTG CCCGGCGGCG CGTCCTGCCC CGCGGAGCCC GGCCAGACGG TGCTGCTGGA TCTGCTGCCG GCGCCGAACG CGACCGTATG CTGGTCCGGG CCGCGGGTCT GCGCCTCGCC GGCGGCGCCG AGCCAGCCGG AACTCCGTGA AGACGGCTGG CATGTCAGCC TGCACGATCT GGCGGGCATC GGCCGGGCCG TGGCCCTGGC CCTGGGGAAG GAGATACCGC AGGCGGTGGC GCCAGACCCC GCGCTGCGCT CGCGGAAGCT CGAACTGCGG GTACTGGTCG CCGAGGACAA CCCGGTCAAC CAGGCGCTGC TTCGCGAGCA GCTCGAGGAA CTGGGCTGCC ACGTGAGTCT GGCCAGCGAT GGGCGGCAGG CGCTGCAACT GTTCGACCAC CAGCGCTTCG ACCTGCTGCT CAGCGACGTC AACATGCCGA ACATGACCGG CTACGAACTG ACCCAGGCCC TGCGCGAACG CGGAGAAACC CTGCCGATCA TCGGTGTCAC CGCCAACGCC CTGCGCGAAG AAGGCGAGCG CTGCCGGGCG GTGGGCATGA ACGCCTGGCT GGTGAAGCCG ATCACCCTGC ATACGCTGCA CGAACAGCTC GGCGCGTTCG GCGCTGGGGG CATGTCGCCA GCCGCCGACG CGCAAGCGAG CGCCAGGCCA GACCAAGCCT GCGACGAGGG TCTGGCGCCG CGGGTGCCTG AACGCATGCG TGGGCTTTTC CTGGCGACCA TGAGCAAGGA TCTGGACGCG GCCCGGGAGG CGCTCCGCCG GGGCGACCCG GAAGGGTTGC GGCAGGGGCT GCATCGCATG GCCGGCTCCC TGGCGGTCAC CCGTGCGCGG GCGCTGGTCG CGCTGTGCCA GCGGGTGGAG GAGGGCCTGG TGGAAGGAAC GCTCGACTGC GCCGCCGGAG AGGTCGCCGA AGTGCTCGCC CATCTCGCGC GGGCGCTGGA ACAGGTGAGA CGGACCGGCT GA
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Protein sequence | MKSVRILEHD NKLLLKWASV SRSLNIGLLC VAVLTVLLFS ICYWSLGRLL QEEEDKVSFH FTRLIGDIRE HEAFLVRIAR KSDKATQKHD HDVVPLQRRL LAREEGVEVY EGREFSFAMP FLLATRHGVD RNASWGPFSL GVLLANFYGG FWSLSAYPAP QLLIYDLSGS TRLAVPAIHA MAERERLREN QPMMVDRMLA RLRETPPGAA DHPVHWVRAD RYRGQAPELL GIVRVDLPEA LWWRDEPNHL IVAASLLDLR RINDFEQLME RPVFDSYSLV SPEGDLLVGE TPAEGLGDGL NFTRHGVAIQ LRSQPAGGWL AVYRIGYASF FRHAQWLLAG LLLVPALVLG GWLGLRWYAR SVVHPAHRAH QQLVESDTFS RTLIQTAPVA LVVLSQDGRQ LVTCNQLAGQ WLGGAAEILA LTSRWKLLDA QGQVAGGICV QVGGRYLQAA FAATRYAGTE AVLCVFNDIT VHCEAEAALA SAKRAADAAS QAKTLFLASM SHEIRTPLYG VLGTLELLDL TELNERQRAY LRTIQGASGT LMQLISDVLD VSKIEAGQMA LAPVVFDPLE LTQEVLGSFS ASAMAKGLQF YACIDPDVPA QLIGDVARIR QVLANLVSNA VKFTDIGRVV LRLKLLSREE GRAALQWQVA DTGIGIAIEQ QKRLFEAFYQ VPGVPHAGGT GLGLSICWHL AEMMGGTLRV VSEAGLGSSF SLVLDLPETE PEGLARQPER WLQGAVLVRS PVRELADSLS GWLARWGCTV PGGASCPAEP GQTVLLDLLP APNATVCWSG PRVCASPAAP SQPELREDGW HVSLHDLAGI GRAVALALGK EIPQAVAPDP ALRSRKLELR VLVAEDNPVN QALLREQLEE LGCHVSLASD GRQALQLFDH QRFDLLLSDV NMPNMTGYEL TQALRERGET LPIIGVTANA LREEGERCRA VGMNAWLVKP ITLHTLHEQL GAFGAGGMSP AADAQASARP DQACDEGLAP RVPERMRGLF LATMSKDLDA AREALRRGDP EGLRQGLHRM AGSLAVTRAR ALVALCQRVE EGLVEGTLDC AAGEVAEVLA HLARALEQVR RTG
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