| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4696 |
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| Symbol | |
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| ID | 3679813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5862200 |
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| End bp | 5867953 |
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| Gene Length | 5754 bp |
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| Protein Length | 1917 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637720052 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_325188 |
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| Protein GI | 75910892 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.257042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCG AACATTTAAC TAGAGAAAGC GATGAATTAG ACTTAAAACA GCTATTAAAA
ACTTTAACTG CTGTCAAAAA AGGTGATTTT TCTGCTCGGA TGCCCATAGA CCAAACAGGT
ATAGCTGGTA AGATAGCTGA TACGCTCAAC GATATTATTG ACCAGAATGA GCGCATGGCA
GCAGAGCTAA AGCGCATTAG TACTGTTGTG GGCAAAGAAG GCAAGATTAC TGAACGCGCT
TCTTTGGGAA ATGTACGCGG TTCTTGGTCA GATAGTGTTA ATTCTGTCAA TACTCTGATT
ACAGATTTAG TCCAGCCGAC AGCAGAAACT ACGCGGGTAA TTCGGGCTGT AGCTAATGGG
GATTTATCAC AAACGATCGC CACAGAAATT GACGGTAGAC CCCTCAAAGG TGAATTTCGC
CAAACTGCCA ATATAGTTAA CACAATGGTG ACAAGGCTGA GTTCCTTTGC GGGTGAGGTG
ACGCGGGTAG CCAGGGAGGT GGGAACGGAG GGGAAATTAG GGGTACAAGC CGAAGTCCAA
GGTGTGGCGG GGACTTGGAA GGATTTGACT GATAATGTCA ACCTAATGGC GGGGAACCTG
ACAGGACAGG TGCGGAATAT TGCCGAAGTG GCGACGGCGA TCGCTAACGG TGACTTATCG
AAGAAAATTA CTGTAGATGT GAAGGGGGAA ATTCTGGAGT TGAAAAACAC CGTCAATACA
ATGGTGGATC AACTTAATTC CTTTGCATCG GAAGTTACAC GGGTGGCGCG GGAAGTAGGG
ACGGAAGGGA AGTTAGGGGT ACAAGCAGAA GTTCGGGGCG TGGCGGGGAC TTGGAAGGAC
TTGACTGATA ATGTGAATTT GATGGCGGGG AACCTCACAG CCCAGGTAAG AAATATTGCC
GAGGTGACGA CGGCGGTAGC CAATGGCGAC TTGTCGAAGA AAATTACTGT CAATGTCAAG
GGTGAAATTT TGGAGTTGAA AAACACCGTC AATATCATGG TGGATCAACT TAATTCCTTT
GCCTCAGAAG TTACCAGGGT GGCGCGGGAG GTGGGCGCAG AGGGAAAATT AGGGGGTCAA
GCAGAAGTGC GAGGGGTGGC GGGGACGTGG AAGGACTTGA CTGATAGCGT CAACTTTATG
GCTGGGAGTT TGACGGCGCA GGTAAGAAAT ATTGCCGAAG TGACGACGGC GGTAGCGACT
GGTGATTTGT CGAAAAAAAT CACCGTGGAT GTCAAGGGCG AAATTTTGGA GTTAAAAAAC
ACTATTAATA CAATGGTGGA TCAACTTAAT TCCTTTGCCT CAGAAGTTAC CAGAGTAGCG
CGGGAAGTAG GAACGGAGGG GAAACTAGGC GTACAAGCAG AAGTGCGCGG GGTGGCTGGG
ACGTGGAAAG ACTTGACAGA TAATGTGAAT TTGATGGCGG GGAACCTGAC AGGACAGGTG
CGGAACATTG CCGAAGTGGC GACAGCGATC GCCAATGGTG ACTTATCGAA GAAAATCACC
GTGGATGTGA GGGGCGAAAT TTTGGAGTTG AAAAACACCA TCAATATCAT GGTGGATCAA
CTGAGTTCCT TTGCATCGGA AGTTACCAGA GTTGCGCGGG AAGTAGGCAG CGAAGGGAAG
TTAGGTGTAC AAGCCGATGT TAGGGGTGTG GCGGGTACAT GGAAGGACTT GACCGATAGT
GTAAATTTTA TGGCGGGGAG TTTGACAGCC CAGGTAAGAA ATATTGCCGA AGTAACGACG
GCGGTAGCGA CTGGCGACTT ATCGAAAAAA ATCACCGTCG ATGTGAAGGG CGAAATTCTC
GAATTAAAAA ACACCGTCAA CACGATGGTA GATCAACTCA ACTCCTTTGC ATCGGAAGTC
ACCAGAGTAG CGCGGGAGGT GGGAACAGAA GGGAAATTGG GCGTACAAGC AGAGGTGAAG
GGTGTAGCTG GTACGTGGAA GGACTTGACC GACAGCGTTA ACTTCATGGC GGGGAGTTTA
ACAGCCCAGG TAAGGAACAT TGCCGAGGTG ACGACGGCGG TAGCCAATGG CGACTTGTCG
AAAAAAATCA CCGTGGATGT GAAAGGGGAA ATTTTGGAGT TGAAAAACAC TATTAATACA
ATGGTGGATC AACTCAATTC CTTCGCCTCA GAGGTGACAA GGGTAGCGCG GGAGGTAGGT
AGTGAGGGGA AATTGGGTGT ACAAGCCTAT GTCCGAGGTG TGGGCGGTAC GTGGAAAGAT
TTGACAGATA ATGTCAACTC GATGGCGGGG AATCTTACAG CCCAGGTCAG AAATATTGCC
GAAGTGACGA AGGCGGTAGC CAATGGCGAC CTGTCGAAGA AAATCACCGT GGATGTGAAA
GGGGAAATCC TCGACTTAAA GAACACTATT AATACAATGG TGGATCAACT CAGTTCCTTT
GCCTCAGAGG TGACGCGGGT AGCGCGGGAG GTGGGAACCG AGGGGAAATT AGGCGGTCAA
GCTGTAGTCC AAGGTGTGGC GGGGACGTGG AAAGATTTGA CAGATAACGT CAACTCAATG
GCGGGGAACT TGACAGCCCA AGTCCGGGGG ATCGCCAGAG TGGTGACGGC GGTGGCGAAT
GGCGACTTGA AACGTAAACT GATGTTAGAT GCCAAAGGGG AAATCGAAAC CTTGGCAGAG
ACAATTAACG AAATGATTGA TACCCTAGCC ACCTTTGCCA ATCAGGTGAC AACAGTGGCG
CGAGAAGTGG GGATAGAAGG AAAATTGGGC GGTCAGGCTA AGGTTCCAGG GGCGGCGGGG
ACATGGAAAG ATTTGACCGA CAACGTCAAC GAACTAGCGG CTACCCTCAC CACCCAGTTA
AGAGCGATCG CCGAAGTTGC TACAGCCGTC ACCAAGGGCG ATTTAACCCG TTCCATCGCT
GTAGAAGCTC AAGGAGAAGT AGCAATCCTC AAAGACAACA TCAACCAGAT GATTGCCAAT
CTGCGGGAGA CAACCCAGAA GAATACAGAA CAAGACTGGT TAAAGACCAA CCTCGCCAAA
TTCACCCGGA TGCTGCAAGG TCAGCGCGAC TTAGAAACCG TATCCAAACT CATTCTCTCA
GAACTTGCAC CACTGGTAGG CGCACAACAC GGCGTATTCT ACTTAATGGA AGGTGCAGAA
AATCAAAGCT ACCTACAACT ACTCAGCACC TATGCTTATC GGGAACGCAA ACATCTAGCT
AACCGCTTCC AGTTGGGTGA GGGTTTAGTT GGACAGTGTG CTTTAGAAAA AGAGCGAATT
TTGTTAACAG AAGTGCCGAG TGATTATGTA AAAATTAGCT CTGGTTTGGG CGAAGCCAAC
CCCCTAAATG CCGTGGTGTT GCCTGTATTA TTTGAAGGAC AAGTGACGGC GGTGATTGAA
CTAGCCTCCT TCCGCCGCTT TAGTGAGATT CATTTGACAT TCTTCGACCA ACTCACCGAA
AGTATTGCGA TCGTTCTCAA CACCATCGCC GCCTCGATGC GTACCGAAGA ATTACTCAAG
CAATCCCAAT CCCTCGCCGA GGAACTACAA ACCCAGCAAA GCGAACTCCG CGAAACCAAC
AAACGCCTAG AACAACAAGC CCAATCACTC AAAGCTTCGG AAGATTTACT GCGGGGACAA
CAAGAAGAAC TACAGCAAAC CAACGCTGAG TTAGAAGAGA AAGCAGAATT GTTAGCTATA
CAGAAAAAAG AAGTAGAACG GAAGAATCGG GAAATTGAAC AAGCGCGACG GTCTTTAGAA
GAGAAAGCCG AACAACTTGC CCTCTCATCC CGCTATAAAT CCGAATTTTT GGCGAATATG
TCCCATGAAC TGCGGACACC TTTAAATAGC TTATTAATAT TGGCGAAATT GTTGACAGAT
AACGTCGATG GCAATTTGAC AGCGAAACAA GTCGAATACA GCCAAACAAT TTACTCAGCC
GGCAATGAAC TATTAGCCTT AATTAACGAT ATTTTGGATC TAGCCAAAAT CGAATCGGGA
ACTATGTCCA TCCATGCGAC CCCAATTCCC TTGTCAGAGT TGGCTGAACA AATTGAACGC
GGCTTTGGGC AAGTAGCGCA AAATAAAGGA CTGACTTTTG CAGTCGAATT AGCCCCTGAG
TTACCAACCA CCGTTAATAC AGATATCAAA CGCCTACAAC AGGTATTAAA AAATCTCCTC
TCCAACGCCT TTAAATTTAC AGAACGTGGA GAAGTCCGCC TCAAAATTGA AGTAGCCAAG
CCAGGATGGA ATTCTAACCA ACAACCTTTA AACTCTGCTC AAAATGTCAT TGCTTTTGCT
GTGAGTGATA CAGGTATTGG CATTGCAGCC GATAAGCAAA AGATTATCTT TGAGGCATTC
CAGCAAGCTG ATGGTACAAC TAGCCGCAAA TACGGCGGTA CGGGATTAGG CTTGTCTATT
AGCCGAGAAA TTGCTCATCT TTTGGGTGGT GAAATTAAAC TTACCAGCTA TCCTGGTCAA
GGTAGTACAT TTACCTTCTA TTTACCGCAA TTTAGTGCTG AATCTACGCT GACCCAGGCA
GACGCGATAA ATCGCGTCTC TACAAAGTAC GACTCAATCC TTGTTGACGA TCGCACCAAC
ATCACTAATT CATCAGCAGA TAATAACATT CTGCTAATTA TCGAGGATGA TGTTAATTTT
GCCAGGATTT TGGTAGATAT GGCACGACAA CACGGATTCC AGGTACTCAG CGCCCAAACT
GGGACAGCCG GACTAAAACT AGCCAAGGAC TTCCAGCCGA TGGCAATTTT ACTCGATATC
CGCTTACCAG AAATGGACGG TTGGACAGTC CTAGACCGCT TGAAACATGA CCCCACTACC
CGCCATATTC CCGTACACAT CATGACCGTC GAGGAAGGAA GACAACGGGG TTTACAATTA
GGGGCGATCG CCTATTTACA AAAACCAGTC ACCAGTGAAG CCATATCCGA AGCCTTAGAC
AAAATTAGAG GTTTCGTAGA ACGTCGGGTT AAGAATTTAC TAGTAGTCGA AGACGACGAA
CTACAACGCC AAAGCATTGT GGAACTCATT GGTAACAGCG ATGTAGCCAC AGTTGCCGTC
GGTACAGGTG CAGCCGCCTT AGAGGCGATT CGTACTCAGC AGTTTGATTG CTTAGTCCTC
GATTTAGGCT TACCTGACAT GACAGGTTTT GAACTCATGG AACAGATTAA GCGAGAAGCC
AACGGCGCAA CCTTACCAAT TATTGTTTAC ACCGGTAGAG AAATCAGCAA AACCCAAGAA
ACAGAACTCA GACGTATTGC TGAGACAATT ATCGTCAAAG ATGTGCGATC GCCCGAACGT
CTCCTAGATG AAACCGCCTT ATTCCTCCAC CGCGTCCAAG CAAACTTACC CACACCCAAA
CGCGAAATCC TCGAACAACT CCATTCTCAA GATTATTCCT TAGTTGGTAA AAAAGTCCTG
ATTGTAGACG ATGATGTCCG CAACATTTTC GCCCTCACCA GTATGCTAGA ACGCTACCAA
ATGCAGGTAA TATACGCTGA AAATGGCAGA GAAGGAATTA GCTTATTAGA AAATACACAA
GATATTGACG TGGTGTTAAT GGATGTGATG ATGCCAGAAA TGGACGGTTA CGAAACCATG
CAATTGATTC GGAAAAAAGA GCAATTTAGA GCCTTACCAA TTATTGCCCT CACCGCCAAA
GCCATGCAAG GCGATCGCGA TCAGTGCATC GCCGCCGGCG CTTCCGACTA CATCGCTAAA
CCAGTAGATA CAGAACAGCT ACTGTCTTTA TTGCGAGTTT GGCTCTATCG TTAA
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| Protein sequence | MATEHLTRES DELDLKQLLK TLTAVKKGDF SARMPIDQTG IAGKIADTLN DIIDQNERMA
AELKRISTVV GKEGKITERA SLGNVRGSWS DSVNSVNTLI TDLVQPTAET TRVIRAVANG
DLSQTIATEI DGRPLKGEFR QTANIVNTMV TRLSSFAGEV TRVAREVGTE GKLGVQAEVQ
GVAGTWKDLT DNVNLMAGNL TGQVRNIAEV ATAIANGDLS KKITVDVKGE ILELKNTVNT
MVDQLNSFAS EVTRVAREVG TEGKLGVQAE VRGVAGTWKD LTDNVNLMAG NLTAQVRNIA
EVTTAVANGD LSKKITVNVK GEILELKNTV NIMVDQLNSF ASEVTRVARE VGAEGKLGGQ
AEVRGVAGTW KDLTDSVNFM AGSLTAQVRN IAEVTTAVAT GDLSKKITVD VKGEILELKN
TINTMVDQLN SFASEVTRVA REVGTEGKLG VQAEVRGVAG TWKDLTDNVN LMAGNLTGQV
RNIAEVATAI ANGDLSKKIT VDVRGEILEL KNTINIMVDQ LSSFASEVTR VAREVGSEGK
LGVQADVRGV AGTWKDLTDS VNFMAGSLTA QVRNIAEVTT AVATGDLSKK ITVDVKGEIL
ELKNTVNTMV DQLNSFASEV TRVAREVGTE GKLGVQAEVK GVAGTWKDLT DSVNFMAGSL
TAQVRNIAEV TTAVANGDLS KKITVDVKGE ILELKNTINT MVDQLNSFAS EVTRVAREVG
SEGKLGVQAY VRGVGGTWKD LTDNVNSMAG NLTAQVRNIA EVTKAVANGD LSKKITVDVK
GEILDLKNTI NTMVDQLSSF ASEVTRVARE VGTEGKLGGQ AVVQGVAGTW KDLTDNVNSM
AGNLTAQVRG IARVVTAVAN GDLKRKLMLD AKGEIETLAE TINEMIDTLA TFANQVTTVA
REVGIEGKLG GQAKVPGAAG TWKDLTDNVN ELAATLTTQL RAIAEVATAV TKGDLTRSIA
VEAQGEVAIL KDNINQMIAN LRETTQKNTE QDWLKTNLAK FTRMLQGQRD LETVSKLILS
ELAPLVGAQH GVFYLMEGAE NQSYLQLLST YAYRERKHLA NRFQLGEGLV GQCALEKERI
LLTEVPSDYV KISSGLGEAN PLNAVVLPVL FEGQVTAVIE LASFRRFSEI HLTFFDQLTE
SIAIVLNTIA ASMRTEELLK QSQSLAEELQ TQQSELRETN KRLEQQAQSL KASEDLLRGQ
QEELQQTNAE LEEKAELLAI QKKEVERKNR EIEQARRSLE EKAEQLALSS RYKSEFLANM
SHELRTPLNS LLILAKLLTD NVDGNLTAKQ VEYSQTIYSA GNELLALIND ILDLAKIESG
TMSIHATPIP LSELAEQIER GFGQVAQNKG LTFAVELAPE LPTTVNTDIK RLQQVLKNLL
SNAFKFTERG EVRLKIEVAK PGWNSNQQPL NSAQNVIAFA VSDTGIGIAA DKQKIIFEAF
QQADGTTSRK YGGTGLGLSI SREIAHLLGG EIKLTSYPGQ GSTFTFYLPQ FSAESTLTQA
DAINRVSTKY DSILVDDRTN ITNSSADNNI LLIIEDDVNF ARILVDMARQ HGFQVLSAQT
GTAGLKLAKD FQPMAILLDI RLPEMDGWTV LDRLKHDPTT RHIPVHIMTV EEGRQRGLQL
GAIAYLQKPV TSEAISEALD KIRGFVERRV KNLLVVEDDE LQRQSIVELI GNSDVATVAV
GTGAAALEAI RTQQFDCLVL DLGLPDMTGF ELMEQIKREA NGATLPIIVY TGREISKTQE
TELRRIAETI IVKDVRSPER LLDETALFLH RVQANLPTPK REILEQLHSQ DYSLVGKKVL
IVDDDVRNIF ALTSMLERYQ MQVIYAENGR EGISLLENTQ DIDVVLMDVM MPEMDGYETM
QLIRKKEQFR ALPIIALTAK AMQGDRDQCI AAGASDYIAK PVDTEQLLSL LRVWLYR
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