Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1782 |
Symbol | |
ID | 1183419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1951178 |
End bp | 1953529 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637393154 |
Product | sensor histidine kinase/response regulator |
Protein accession | NP_791607 |
Protein GI | 28868988 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATAT CGCTCAAAAA CAGGCTTTCG TTCAAGCAGG CACGCCTTGC CGTACTGATC GGCTTTGCGC TTGGCACCCT GTTGAGCGTG GCGCAGATTG CGATCGATTA TGCCAGCGAA GACGCCTCCA TCAATCGCGA AATCGGATCA CTGCTGGAAA TCATCCAGAA CCCGGCCTCG CGTATCGCCT ACAACATCGA CGCCGAACTC GCCCAGGAGC TCACCCTTGG GCTGTTGCAC TCCCCTGCCG TGGTCAGTGC CAGGCTGACC GACAACAACG ACACGGTGCT CGCCAGCGTC GAACGAGCGA CTGCGACCGG GCGTTACCGG GTGCTCAGTG ACTGGCTGTT CGGCGAAAGC CGGCAGTTTC AGGAGAAGCT GCACCTTGAC CACCTGCCAG ACGAAACCAT CGGCACACTG TACCTGACCG TGGACACCTT CGCGTTCGGC AGCCACTTTC TGCAACGCGC CGAGATCACC CTGCTCAATG GCTTTGTCCG CAGTCTGGCG CTGGCTGGCA TTCTGACCAT TCTGTTCTAC GCAACCCTGA CCAAGCCGCT GGTGAGGGTC ATCCGCGACT TGAGCAGCCG CGACCCACGC ACTGTCGATC AGGCGAAAAT CACCTGCCCG CCGTATCACG AGAAGGACGA AATCGGCGTT CTGGTCGCCA CGTTCAACCG CCAGTTCGAA ACCATGAGCA GCGAATTTTC CAGGCGCCGC GCCGCCGAGG ATCGGCTGAC CGACCATCTC AACGAGCTGG AAAACATTGT TTCGGCGCGT ACCAACGAGC TCAAGTCCAG CAACATGCGC CTGCGCGAGT CCAACGAAGA ACTGCAGATC GCGCGCAGCA CGGCACTGGA CATGGCGAAT GCACGCTCGG CGTTTCTGGC GCACATGAGT CATGAAATCC GCACGCCACT CAACGGTTTG CTGGGCATGC TGGCGCTGTC GCTTGACAGC CCGCTCGGGG CCGAGCAACG CCAGCAACTG ATGATCGCCC ACGACTCGGG CAAGGTACTG GTCGAACTGC TCAACGATAT TCTCGACATG TCCAAGTTCG ACGCCGGCCA TCTGGAGATC GAGCGCATTC CGTTCGACCT TGGGGGGCTG ATCGAGGACA CGGCCAATCT GCTCTCGCAG AATGCCGCGC CCAGCGTGGA ACTGACCTGC CTGATTGCGC CGGATTTTCC GGCGATGGTC ACCGGCGACC CGACCCGGGT CCGGCAGATC GTCAGCAACC TGCTGTCCAA CGCGCTCAAA TTCACGCGTT TCGGGCGTGT CGATGTGCGC CTGACCCACC ATCAGGATGC GGCCAGCGGG GAACATCGCG TACGCATCGA GGTGCGCGAC ACCGGTATCG GCATCGCGCA GGATGCCCAG GCAAAAATAT TCCAGCCGTT CACCCAGGCC GAAACCGCAA TCACCCGCCA GTACGGCGGC ACCGGGCTGG GCCTGGCGCT GACCAACAAC CTTTGCGAGG CCATGCACGG CACATTGAGC ATCCAGTCGC AATCGGGTTT CGGCAGCCAG TTCTGCGCTG AACTGCCATT ACCGGTGCAC GTGCCTGCGG TTGCGCAGAA CCCGCTCAGA GGCCGGGTAA CTGTGGTCAG CTCGGCCGGC AGCGGTCTTG TGGAATTGCT CGGCAGCCTG CTGCCCTTCT GGGGAGTGGA CCTCAAGCGG CGCAGTATCG ACGACAGCCC GGACGATCTG GACCTCGACA ATGCTCCAGA TCTGGTCATC ACCGACTGCC CCGAGTGCCT GTTCGCGATT CGCCCGACCA CGCCGGTGCC GATTTTGCTG GTCACGGCTT ACGGCAATTT CATGCCGGGC GAACAGGTTG CAGCCCTTGC GCCATTGCAA CAGCAGGCCC GGCCCTTGGC CCGCAACGCG CTGTACCACG CACTGCGACG CGTCCTGAAC CAGGAAGACA CCGGCAAGCG GGACACGCTG GCGCTCGATC AGCCGACCCG GCGTGTGGCC CGCGTCCTGC TCGTGGAAGA CAACCCGGTC AATCAACTGG TGGCCAAAGG CATACTGAGC AAGCTCGGCT GCGAAGTGAT CATCAGCAGT CACGGTGGGG AGGCGCTGGA ACAACTGGAG CACGGCCATT TCGACCTGGT GTTGATGGAC TGCAACATGC CGGTCATGGA CGGCTACCAG GCCACCCGCC AGATCCGCAG CAGCGGCCGC TGGCCCAATC TGCCGATCGT TGCGCTGACC GCCAACGCCA TGCCCGACGA GCGTGAACGC TGCAAGGCGG CCGGCATGAA CGACTACCTG GCCAAGCCGT TCCGACGCGC TGAACTGGCC GGCATTCTGG ATCAATGGAT CCCCGTCACT GACGACCGCT GA
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Protein sequence | MDISLKNRLS FKQARLAVLI GFALGTLLSV AQIAIDYASE DASINREIGS LLEIIQNPAS RIAYNIDAEL AQELTLGLLH SPAVVSARLT DNNDTVLASV ERATATGRYR VLSDWLFGES RQFQEKLHLD HLPDETIGTL YLTVDTFAFG SHFLQRAEIT LLNGFVRSLA LAGILTILFY ATLTKPLVRV IRDLSSRDPR TVDQAKITCP PYHEKDEIGV LVATFNRQFE TMSSEFSRRR AAEDRLTDHL NELENIVSAR TNELKSSNMR LRESNEELQI ARSTALDMAN ARSAFLAHMS HEIRTPLNGL LGMLALSLDS PLGAEQRQQL MIAHDSGKVL VELLNDILDM SKFDAGHLEI ERIPFDLGGL IEDTANLLSQ NAAPSVELTC LIAPDFPAMV TGDPTRVRQI VSNLLSNALK FTRFGRVDVR LTHHQDAASG EHRVRIEVRD TGIGIAQDAQ AKIFQPFTQA ETAITRQYGG TGLGLALTNN LCEAMHGTLS IQSQSGFGSQ FCAELPLPVH VPAVAQNPLR GRVTVVSSAG SGLVELLGSL LPFWGVDLKR RSIDDSPDDL DLDNAPDLVI TDCPECLFAI RPTTPVPILL VTAYGNFMPG EQVAALAPLQ QQARPLARNA LYHALRRVLN QEDTGKRDTL ALDQPTRRVA RVLLVEDNPV NQLVAKGILS KLGCEVIISS HGGEALEQLE HGHFDLVLMD CNMPVMDGYQ ATRQIRSSGR WPNLPIVALT ANAMPDERER CKAAGMNDYL AKPFRRAELA GILDQWIPVT DDR
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