| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1404 |
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| Symbol | |
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| ID | 3774117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1455395 |
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| End bp | 1456084 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799836 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_400421 |
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| Protein GI | 81300213 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.153238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATTC TGCTCGTTGA CGACGAAGAA GCCCTGACTG CGCCACTCCA TCGCATGTTG
CGCCGCGAAG GCTACGACGT GGATGTGGCG AGTGATGGTC AGACGGGAGA ACAGCTGGCA
ACCCACCAGC CCTACGACTT GCTGATTCTT GATTGGATGC TGCCCGAGCG ATCGGGGTTG
GATCTCTGTC GCTCCGTTCG ACAGCGCGAT CGCCAAGTAC CAGTTCTGTT TCTGACTGCT
CGCGATACAG TCGATGACCG AGTTCAGGGC TTAGATGCCG GAGCTGACGA CTACTTGGTT
AAACCCTTCG AACTGAAGGA ACTCCTAGCC CGCGTCCGAG CCTTGCTCCG GCGATCGCCC
CGACAGGAAA CCTCGGAGGC TCCGCGCCTT GCGGGTGGCG ATCTGGAACT GGATACGCCC
AACCAACTGG CCTATCGTCA GGGCCGTCGC ATTGAGCTGT CCGAAAAAGA GACGCAGTTG
CTGGCAGTAC TCATGCAGCA TCCGGGCCAA CTGGTCAGCC ACCAAGAGCT GCAAGCGCAA
GTCTGGGGTT CTGCCAATCC CCCCAGTAGC AATGTTCTGG CCGCACAAAT TCGCCTCCTG
CGCCGCAAGC TGGAAGCCCC GGGCGAAACG CCGCTGATCT TTAGCGTCTA TGGCAAAGGT
TACCGCTTCC AATTCGGAGA TTTGGCCTAA
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| Protein sequence | MRILLVDDEE ALTAPLHRML RREGYDVDVA SDGQTGEQLA THQPYDLLIL DWMLPERSGL
DLCRSVRQRD RQVPVLFLTA RDTVDDRVQG LDAGADDYLV KPFELKELLA RVRALLRRSP
RQETSEAPRL AGGDLELDTP NQLAYRQGRR IELSEKETQL LAVLMQHPGQ LVSHQELQAQ
VWGSANPPSS NVLAAQIRLL RRKLEAPGET PLIFSVYGKG YRFQFGDLA
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