| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0168 |
|---|
| Symbol | |
|---|
| ID | 4662502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 202560 |
|---|
| End bp | 203939 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639818364 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_965619 |
|---|
| Protein GI | 120601219 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.564625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.730975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA CGACGCACAT CCTCGTCATA GACGACGAGA AGAACTATCT GCTGGTGCTC
GAAGCCCTGC TTACGGACGC GGGCTACGCT GTCACGGCCC TCAACGACCC CGAGACGGCC
CTCGCCTTTC TTGAGGAGAG CGAGGTCGAC GTGGTCATCA CCGACATGAA GATGCCGCGC
GTGACCGGGC GAGAGGTGCT CGAACGGGTC AAGAAGACGT GGCCGCACAT CCCCGTGTGC
ATCATGACCG CGTTCGGTTC CATCGAAGGG GCCGTCGACG TGATGAAGTA CGGGGCCTTC
GACTACATCA CCAAACCGTT CTCCAACGAC GAACTGCTGC TCTCGGTGCA GAACGCCGCC
GAACTCTCGC GGGTACACCG CCAGTACCGC GCCCTGCGCG CCAACCTCGA AGAGCGCTAC
GGCACGCATC AGATCATCGG TCGCAGCAAG GCCATCCGCG AAGTGCTCGA CATGGTCGAC
AGGGCGGCCC CCAGCCGTTC GACGGTGCTC ATCACCGGAG AGTCGGGCAC CGGCAAGGAA
CTGGTGGCCC GGGCCATCCA TTTCTCGTCG CCCCGCAACA GCGGGCCCTT CGTCAGCGTC
AACTGCATGG CGCTGAATCC GGGCGTGCTC GAAAGCGAAC TGTTCGGGCA TGAGAAAGGC
TCGTTCACCG GGGCCATGGC CATGCGTCGC GGGCGGTTCG AACAGGCCGA CGGCGGGACG
CTCTTCCTCG ACGAAATCGG TGAGCTGACC CCCGAGTTGC AGGTGAAACT GCTGCGGGTG
CTTCAGGAGC GCCGCTTCGA ACGCGTGGGC GGCGGTGACG AGATAGAGGT CGACATCCGC
GTGGTGGCCG CCACCAACAA GGACCTTCAG AAGGAAGTGG AGAACGGAAC GTTCCGCGAA
GACCTCTACT ACCGGCTCAA TGTCGTCCAT GTGGCCCTGC CGCCCCTGCG CGAACGCCGC
GAGGACATCC CCCTGCTGGT GGGGCATTTC GTCGAGAAAC TCGCCCGTGA CAACGGCATG
AGGCCCAAGA CCTTCACCCC CGAGGCCCAC GACTATCTCA CAGGGTATGA ATGGCCCGGC
AACATCCGCC AGTTGCAGAA CGTGGTTGAG CGGTGCCTCG TGCTGGTGGC CAGCGACACC
GTGGGGGTCG ACGACCTGCC GCCGGAGATA CGCGACGAGG AGTCGCAGCT GAAGAGCGCC
GTGGACCTGT TGCCTGTGCG TCTCGACCTT GCCGACACGC TGGAGAAGAT CGAGGCTGCA
CTCATCCGCA GGGCTCTCGT GCGCGCCGAA TTCGTGCAGG TGAAGGCCGC AGAGCTTCTC
GGCATCTCCA AGAGCCTGCT CCAGTACAAG CTGAAGAAAT ACGGCATAAC CGGCCACTAG
|
|---|
| Protein sequence | MSETTHILVI DDEKNYLLVL EALLTDAGYA VTALNDPETA LAFLEESEVD VVITDMKMPR
VTGREVLERV KKTWPHIPVC IMTAFGSIEG AVDVMKYGAF DYITKPFSND ELLLSVQNAA
ELSRVHRQYR ALRANLEERY GTHQIIGRSK AIREVLDMVD RAAPSRSTVL ITGESGTGKE
LVARAIHFSS PRNSGPFVSV NCMALNPGVL ESELFGHEKG SFTGAMAMRR GRFEQADGGT
LFLDEIGELT PELQVKLLRV LQERRFERVG GGDEIEVDIR VVAATNKDLQ KEVENGTFRE
DLYYRLNVVH VALPPLRERR EDIPLLVGHF VEKLARDNGM RPKTFTPEAH DYLTGYEWPG
NIRQLQNVVE RCLVLVASDT VGVDDLPPEI RDEESQLKSA VDLLPVRLDL ADTLEKIEAA
LIRRALVRAE FVQVKAAELL GISKSLLQYK LKKYGITGH
|
|---|
| |