Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2807 |
Symbol | |
ID | 5695664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3386458 |
End bp | 3387858 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641265421 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001530687 |
Protein GI | 158522817 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.75933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAA CACAGAAGGA GAACATGAAA AAGCACGCCA CAATCCTGAT TGTTGATGAT GACGCCGGCC ACCGCTCCAT GCTTCGCACT CTTCTGGAGG GGTGGGGCCA CCAGACGGCC GAGGCCGACG ACGGCCTGGC CGCGGTGGAA TATGTTCAAA CCCGGCCCGC GGACATCGTG CTCATGGACC TGAAGATGGT CCACATGTCC GGCATGGAGG CCTTAGAGCA GATCCGGTCT TTTAACCCCG GAGTGCCGGT GATCATCATG ACCGCCTTCT CCTCGGTGGA CACGGCGGTG GAGGCTCTGA AAAAAGGGGC TTACGACTAC CTGACCAAGC CCCTGGATTT TGAAAAGCTG CGCCTTACGC TGGAGCGGAT TCTGGAGGCG GCCCGCCTGC GAAAGGAGAA CCGCCACTTA AAGGAGCGGC TGGGCAGCCG GTTTTCCAGG GACCAGATCA TCGGAAACAG TCCGGCCATG ACCCGGCTGC TGGAAACCGT GGAGCAGGCG GCCCCGTCCG ACGCCAGCAT CCTGATCACC GGCGAATCCG GCACCGGCAA GGAGCTGATC GCCGGGGCCC TGCATTTCAA CAGCGCCCGC AGGGAGGGCC CCTTTGTCAA GATCAACTGC GCCGCCATCA CCGAGACCCT GCTGGAGTCC GAGCTGTTCG GCCATGAAAA GGGGTCCTTT ACCGGCGCGG ACAAGGCCAA GAAGGGAAGG TTTGTCCAGG CCGACACCGG CACCATTCTG CTGGACGAAA TCGGCGAGAT GCCCCTGTCC ATGCAGGCCA AACTGCTGCG GGTGCTTCAG GAAAAAGAGG TCACCCCCGT GGGCGGGGAA CGCACCATTC ACGTGGACGT ACGGGTCATC GCCTCCACCA ACAAGGACCT GCATGCCCTG GTGGAGGCCG GCACTTTTCG GGAAGACCTG TTTTTCCGGC TCAACGTGGT CAATCTGGAG GTGCCGCCCC TGCGCAACAG AAAAGAGGAC ATTCCCGAGC TGGCCCACCA TTTTCTGACC CTGTTTTCCG CCAAGAACAA AAAGCAGGTC CAGGGGTTTA CGCCCGACGC CATGGAGGCC CTGCTGGCCT ATTCATGGCC GGGCAACGTG CGGGAGTTGA TGAACGCCGT GGAACGGGCC GTGGTCCTGG CCCGGTCTGA ATACCTCTCC CGTGAGGACG TGCTGCTGAT GGCCGAGCGG CAGGCCCCGG CCCAGGCCAC TCCGCCCCTT GCCGCGGGCG CCGGCCCGGC GTCCCATGGC CTGCCGTTGT CGGAAGTGGA AAAGGACGCC ATCTTAAGAA CCCTGGAAGC CACGGATAAC AACAAAAGCG AGGCCGCCCG CCGCCTGGGC ATCACGCGAA AGACATTACA GAAAAAACTG AAACAGTACG GGGTCTCCTG A
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Protein sequence | MNETQKENMK KHATILIVDD DAGHRSMLRT LLEGWGHQTA EADDGLAAVE YVQTRPADIV LMDLKMVHMS GMEALEQIRS FNPGVPVIIM TAFSSVDTAV EALKKGAYDY LTKPLDFEKL RLTLERILEA ARLRKENRHL KERLGSRFSR DQIIGNSPAM TRLLETVEQA APSDASILIT GESGTGKELI AGALHFNSAR REGPFVKINC AAITETLLES ELFGHEKGSF TGADKAKKGR FVQADTGTIL LDEIGEMPLS MQAKLLRVLQ EKEVTPVGGE RTIHVDVRVI ASTNKDLHAL VEAGTFREDL FFRLNVVNLE VPPLRNRKED IPELAHHFLT LFSAKNKKQV QGFTPDAMEA LLAYSWPGNV RELMNAVERA VVLARSEYLS REDVLLMAER QAPAQATPPL AAGAGPASHG LPLSEVEKDA ILRTLEATDN NKSEAARRLG ITRKTLQKKL KQYGVS
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