| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2907 |
|---|
| Symbol | |
|---|
| ID | 6087659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3201963 |
|---|
| End bp | 3203327 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641597976 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_001721634 |
|---|
| Protein GI | 170025129 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAC ATAAAGCGCA TATTTTGGTC GTTGATGATG ACCTGAGCCA CTGCACAATT
ATCCAGGCTT TAATGAAAGG CTGGGGTTAT CAAACCACGC CAGCCCACAA TGGATTAGAG
GCCATCGAAC TGGCTAAAGA GATCCCTTTC GATTTAATTC TGACTGATGT GCGAATGTCT
GAAATGGATG GTATTGAGGC ATTAAAGGCA ATTAAAGCCT ATAACCCGGC AATCCCTATT
TTAATTATGA CGGCTTATTC CAACGTTGAA TCTGCGGTTG AGGCAATTAA AGCCGGGGCA
TACGATTATC TTACCAAACC GCTTGATTTC GACATGTTAC AACTCACCCT TGAGCGGGCA
CTGGAACATA CGCATCTCAA GAATGAGAAT AAAACACTTA AACAGCAGAT CATCAGTAAC
CAAAATATTA TTGGTCGCAG CCCACAAATG CGCTATCTGA TGGATATGGT TGGCATGATT
GCGCCTTCTG AAGCGACGGT GTTGATATGT GGAGAATCGG GTACGGGCAA AGAAATTATT
GCCCGCTCAG TTCATGCTAA CAGCTCCCGT AAAGATCAAC CGTTGGTGAT TGTTAACTGC
GCGGCACTCA GTGAATCATT GCTGGAGTCC GAGCTATTCG GCCATGAAAA AGGGGCGTTT
ACTGGCGCAG ATAAACGTCG GGAAGGGCGC TTTATGGAGG CACATAAGGC AACGTTATTT
TTGGATGAGA TTGGTGAAAT CTCAGGGTTG ATGCAGGCAA AACTCCTGCG TGCTATCCAA
GAACGGGAGA TCCAGCGCGT TGGCAGTAAT CAGACATTAG CTATTGATGT CAGGTTGATT
GCCGCCACTA ACCGCAATCT TAAAGCCGAT GTTGATAGTG GAAAGTTTCG CCAGGATCTC
TACTATCGAT TAAATGTGGT CACGATAGAT ACCCCGGCGT TGAGAGAGCG AAGCGAAGAT
ATTCCGCCGT TGTCGATGCA TTTCTTGGAA AAGTTTGCGC TCAAGAACCG TAAATCAATC
AAAGGATTCA CACCGCAAGC GATGAATATG CTGTTGAAAT ACAACTGGCC TGGTAACGTG
CGTGAATTGG AAAATACGGT GGAGCGTGCG GTGATTTTAC TGACCGGTGA TTTCATCAGC
GAGAAGGAGT TGCCGTTAAA TATTAATCAT TATATTCAGG AGAATGCCGG TAGTGAGAAT
ATAGGTTATG AGGATGCAGA AAAACCTATC CAGTCTCTCG AATGGGTCGA AATAGACGCT
ATTTTGACTG CGTTGGAAAA GACGGGAGGC AATAAAACAG AGGCAGCAAA ACATTTAGGC
ATCACGCGCA AAACATTGCA GGCAAAATTA CAAAAAAGAA ATTAG
|
|---|
| Protein sequence | MTTHKAHILV VDDDLSHCTI IQALMKGWGY QTTPAHNGLE AIELAKEIPF DLILTDVRMS
EMDGIEALKA IKAYNPAIPI LIMTAYSNVE SAVEAIKAGA YDYLTKPLDF DMLQLTLERA
LEHTHLKNEN KTLKQQIISN QNIIGRSPQM RYLMDMVGMI APSEATVLIC GESGTGKEII
ARSVHANSSR KDQPLVIVNC AALSESLLES ELFGHEKGAF TGADKRREGR FMEAHKATLF
LDEIGEISGL MQAKLLRAIQ EREIQRVGSN QTLAIDVRLI AATNRNLKAD VDSGKFRQDL
YYRLNVVTID TPALRERSED IPPLSMHFLE KFALKNRKSI KGFTPQAMNM LLKYNWPGNV
RELENTVERA VILLTGDFIS EKELPLNINH YIQENAGSEN IGYEDAEKPI QSLEWVEIDA
ILTALEKTGG NKTEAAKHLG ITRKTLQAKL QKRN
|
|---|
| |