Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0549 |
Symbol | |
ID | 4251777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 633979 |
End bp | 634776 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638117108 |
Product | response regulator receiver protein |
Protein accession | YP_732686 |
Protein GI | 113968893 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCATT TATCGCCTAG CGAACTCTCG ATTCTCATTG TTGAGCCATC GGAAACCCAG CGCCGCATTA TCATCAAGCG TTTACAGCAA GAAGGCATTA TCAGCATCCA AAATGCCGCA AGTTTGACCC AAGCAAGGGA GTTGATTGCC CGCCACAAAC CGGATCTCAT CGCTAGCGCC ATGTATTTTG AAGATGGCAC CGCGACCGAG TTTTTAAGCT ACCTGCGCAC CAAAAGCGAA TATAAAGACA TTCAATTTAT GTTGGTTTCG AGCGAATGTC GCCGCGAGCA ATTGGAAATT TTCCGCCAGT CTGGCGTGGT CGCGATTCTG CCAAAACCTT TTAATGCCGA ACACTTAGGC AAGGCGCTAA ATGCGACCAT CGATTTGCTC AGCCACGATG AACTCGACCT AAGTCACTTC GATGTGCATG ACGTGCGAGT GCTCGTGGTC GATGACAGCC GCATGGCGCG CAATGTGATT AAACGTACCA TTGGCAACCT TGGGATCAAG CAGATCACCG AAGCGGAAGA TGGCGCTCAA GCCATTGAGT TAATGCGTAA TAATATGTTT GACCTGATCA TTACCGATTA CAATATGCCC AGTGTTGATG GCCTAGCACT CACTCAATTT ATCCGTAATG AAAGCCAGCA ATCCCATGTG CCTATCCTCA TGGTGTCTTC GGAAGCGAAT GATGCTCACC TGAGCAATGT CTCTCAGGCG GGAGTCAATG CCCTGTGCGA TAAACCCTTC GAACCCAAAT TGGTAAAGCA GCTCTTATAT CAACTGCTCG AAGAATAA
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Protein sequence | MTHLSPSELS ILIVEPSETQ RRIIIKRLQQ EGIISIQNAA SLTQARELIA RHKPDLIASA MYFEDGTATE FLSYLRTKSE YKDIQFMLVS SECRREQLEI FRQSGVVAIL PKPFNAEHLG KALNATIDLL SHDELDLSHF DVHDVRVLVV DDSRMARNVI KRTIGNLGIK QITEAEDGAQ AIELMRNNMF DLIITDYNMP SVDGLALTQF IRNESQQSHV PILMVSSEAN DAHLSNVSQA GVNALCDKPF EPKLVKQLLY QLLEE
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